Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 LINC00895-201ENST00000629028 1637 ntBASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 BX664615.1-201ENST00000443558 458 ntBASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 AP003041.3-201ENST00000527151 707 ntBASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 AL049597.2-201ENST00000565575 961 ntBASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 AC005912.2-201ENST00000619492 2400 ntBASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH1Q9Y2L9 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 GGT3P-204ENST00000453783 1664 ntBASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 OR2I1P-210ENST00000642037 4691 ntBASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 LINC00552-201ENST00000625151 2579 ntBASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 AC097637.2-201ENST00000624096 1997 ntBASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.75■□□□□ 0.11
LRCH1Q9Y2L9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms