Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 AC002472.2-201ENST00000442739 958 ntBASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 SLC25A1P3-201ENST00000395415 828 ntBASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 AC236430.1-201ENST00000402231 743 ntBASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 MIR4492-201ENST00000581627 80 ntBASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 AD000864.1-201ENST00000624076 2295 ntBASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.75■□□□□ 0.43
SSX2IPQ9Y2D8 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 AC241585.1-201ENST00000433527 519 ntBASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 RN7SL204P-201ENST00000582831 262 ntBASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 AC073389.1-201ENST00000595595 795 ntBASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 AC018529.1-201ENST00000613063 361 ntBASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSX2IPQ9Y2D8 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms