Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 AC125807.1-201ENST00000483097 614 ntBASIC17.39■□□□□ 0.37
CDH9Q9ULB4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 AC107890.1-201ENST00000422478 521 ntBASIC17.38■□□□□ 0.37
CDH9Q9ULB4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 AC024267.1-201ENST00000582320 895 ntBASIC17.38■□□□□ 0.37
CDH9Q9ULB4 AC003101.2-201ENST00000612557 442 ntBASIC17.38■□□□□ 0.37
CDH9Q9ULB4 AC007967.4-201ENST00000614700 386 ntBASIC17.38■□□□□ 0.37
CDH9Q9ULB4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH9Q9ULB4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 U82695.1-201ENST00000635752 1889 ntBASIC17.37■□□□□ 0.37
CDH9Q9ULB4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 AL353705.2-201ENST00000428243 662 ntBASIC17.37■□□□□ 0.37
CDH9Q9ULB4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 DUX4L27-201ENST00000554796 1261 ntBASIC17.37■□□□□ 0.37
CDH9Q9ULB4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 AC140878.1-201ENST00000565277 250 ntBASIC17.37■□□□□ 0.37
CDH9Q9ULB4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 AC011676.5-201ENST00000624864 2660 ntBASIC17.37■□□□□ 0.37
CDH9Q9ULB4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms