Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 SLC25A47P1-201ENST00000531577 414 ntBASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 APOA1-205ENST00000375329 927 ntTSL 2 BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 FAM86LP-201ENST00000478302 853 ntBASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 TIMM17BP1-201ENST00000545713 516 ntBASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 AL359711.2-201ENST00000563105 872 ntBASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 AC120045.2-201ENST00000567334 178 ntBASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PHRF1Q9P1Y6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PHRF1Q9P1Y6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PHRF1Q9P1Y6 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC21.61■■□□□ 1.05
PHRF1Q9P1Y6 AC078925.2-201ENST00000624013 1973 ntBASIC21.61■■□□□ 1.05
PHRF1Q9P1Y6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PHRF1Q9P1Y6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PHRF1Q9P1Y6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PHRF1Q9P1Y6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.61■■□□□ 1.05
PHRF1Q9P1Y6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
PHRF1Q9P1Y6 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PHRF1Q9P1Y6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC21.61■■□□□ 1.05
PHRF1Q9P1Y6 BRWD1P1-201ENST00000401091 371 ntBASIC21.61■■□□□ 1.05
PHRF1Q9P1Y6 KRT18P64-201ENST00000434946 1219 ntBASIC21.61■■□□□ 1.05
PHRF1Q9P1Y6 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC21.61■■□□□ 1.05
PHRF1Q9P1Y6 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC21.61■■□□□ 1.05
PHRF1Q9P1Y6 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC21.61■■□□□ 1.05
PHRF1Q9P1Y6 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC21.61■■□□□ 1.05
PHRF1Q9P1Y6 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC21.61■■□□□ 1.05
PHRF1Q9P1Y6 AC133539.2-201ENST00000604757 467 ntBASIC21.61■■□□□ 1.05
PHRF1Q9P1Y6 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC21.61■■□□□ 1.05
PHRF1Q9P1Y6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC21.61■■□□□ 1.05
PHRF1Q9P1Y6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC21.6■■□□□ 1.05
PHRF1Q9P1Y6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PHRF1Q9P1Y6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC21.6■■□□□ 1.05
PHRF1Q9P1Y6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PHRF1Q9P1Y6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
PHRF1Q9P1Y6 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PHRF1Q9P1Y6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PHRF1Q9P1Y6 MGST3-203ENST00000367885 680 ntTSL 2 BASIC21.6■■□□□ 1.05
PHRF1Q9P1Y6 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC21.6■■□□□ 1.05
PHRF1Q9P1Y6 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC21.6■■□□□ 1.05
PHRF1Q9P1Y6 EMC4-209ENST00000559421 497 ntTSL 2 BASIC21.6■■□□□ 1.05
PHRF1Q9P1Y6 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC21.6■■□□□ 1.05
PHRF1Q9P1Y6 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC21.6■■□□□ 1.05
PHRF1Q9P1Y6 AL139099.5-201ENST00000635274 300 ntBASIC21.6■■□□□ 1.05
PHRF1Q9P1Y6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PHRF1Q9P1Y6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC21.6■■□□□ 1.05
PHRF1Q9P1Y6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PHRF1Q9P1Y6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC21.6■■□□□ 1.05
PHRF1Q9P1Y6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC21.6■■□□□ 1.05
PHRF1Q9P1Y6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PHRF1Q9P1Y6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
PHRF1Q9P1Y6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PHRF1Q9P1Y6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PHRF1Q9P1Y6 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
PHRF1Q9P1Y6 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC21.6■■□□□ 1.05
PHRF1Q9P1Y6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PHRF1Q9P1Y6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PHRF1Q9P1Y6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.59■■□□□ 1.05
PHRF1Q9P1Y6 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
PHRF1Q9P1Y6 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PHRF1Q9P1Y6 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PHRF1Q9P1Y6 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PHRF1Q9P1Y6 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PHRF1Q9P1Y6 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PHRF1Q9P1Y6 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC21.59■■□□□ 1.05
PHRF1Q9P1Y6 ACTG1P3-201ENST00000431775 1114 ntBASIC21.59■■□□□ 1.05
PHRF1Q9P1Y6 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC21.59■■□□□ 1.05
PHRF1Q9P1Y6 AL355864.2-201ENST00000447420 863 ntBASIC21.59■■□□□ 1.05
PHRF1Q9P1Y6 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC21.59■■□□□ 1.05
PHRF1Q9P1Y6 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC21.59■■□□□ 1.05
PHRF1Q9P1Y6 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC21.59■■□□□ 1.05
PHRF1Q9P1Y6 C2orf69P2-201ENST00000562032 1123 ntBASIC21.59■■□□□ 1.05
PHRF1Q9P1Y6 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
PHRF1Q9P1Y6 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms