Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16■□□□□ 0.15
CUEDC1Q9NWM3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16■□□□□ 0.15
CUEDC1Q9NWM3 HLA-J-203ENST00000494367 1087 ntBASIC16■□□□□ 0.15
CUEDC1Q9NWM3 AC109635.5-201ENST00000533593 962 ntBASIC16■□□□□ 0.15
CUEDC1Q9NWM3 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16■□□□□ 0.15
CUEDC1Q9NWM3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16■□□□□ 0.15
CUEDC1Q9NWM3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16■□□□□ 0.15
CUEDC1Q9NWM3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
CUEDC1Q9NWM3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CUEDC1Q9NWM3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CUEDC1Q9NWM3 AC099522.2-201ENST00000607001 744 ntBASIC16■□□□□ 0.15
CUEDC1Q9NWM3 AC021097.1-201ENST00000607902 574 ntBASIC16■□□□□ 0.15
CUEDC1Q9NWM3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16■□□□□ 0.15
CUEDC1Q9NWM3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16■□□□□ 0.15
CUEDC1Q9NWM3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16■□□□□ 0.15
CUEDC1Q9NWM3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16■□□□□ 0.15
CUEDC1Q9NWM3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CUEDC1Q9NWM3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CUEDC1Q9NWM3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CUEDC1Q9NWM3 GPAA1P2-202ENST00000606848 1787 ntBASIC16■□□□□ 0.15
CUEDC1Q9NWM3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16■□□□□ 0.15
CUEDC1Q9NWM3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16■□□□□ 0.15
CUEDC1Q9NWM3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16■□□□□ 0.15
CUEDC1Q9NWM3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 CNN2P11-201ENST00000429351 262 ntBASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 MIR4469-201ENST00000583919 79 ntBASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CUEDC1Q9NWM3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 AC002056.1-201ENST00000395613 760 ntBASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 AC092474.2-201ENST00000424288 719 ntBASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 AC112191.1-201ENST00000523689 701 ntBASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 AC092902.6-201ENST00000641783 218 ntBASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 AC016027.1-202ENST00000607927 1699 ntBASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 AL662844.4-201ENST00000606367 2838 ntBASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms