Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.4■□□□□ 0.38
TLR9Q9NR96 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TLR9Q9NR96 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.4■□□□□ 0.38
TLR9Q9NR96 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.4■□□□□ 0.38
TLR9Q9NR96 RPS2P32-201ENST00000439199 892 ntBASIC17.4■□□□□ 0.38
TLR9Q9NR96 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TLR9Q9NR96 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.4■□□□□ 0.38
TLR9Q9NR96 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TLR9Q9NR96 KRT17P8-201ENST00000540749 863 ntBASIC17.4■□□□□ 0.38
TLR9Q9NR96 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.4■□□□□ 0.38
TLR9Q9NR96 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.4■□□□□ 0.38
TLR9Q9NR96 RAB43P1-201ENST00000561790 589 ntBASIC17.4■□□□□ 0.38
TLR9Q9NR96 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.4■□□□□ 0.38
TLR9Q9NR96 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.4■□□□□ 0.38
TLR9Q9NR96 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.4■□□□□ 0.38
TLR9Q9NR96 AL033527.5-202ENST00000641632 1098 ntBASIC17.4■□□□□ 0.38
TLR9Q9NR96 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TLR9Q9NR96 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.4■□□□□ 0.38
TLR9Q9NR96 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TLR9Q9NR96 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TLR9Q9NR96 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.4■□□□□ 0.38
TLR9Q9NR96 AC080080.1-201ENST00000625121 2420 ntBASIC17.4■□□□□ 0.38
TLR9Q9NR96 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TLR9Q9NR96 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
TLR9Q9NR96 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.4■□□□□ 0.38
TLR9Q9NR96 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
TLR9Q9NR96 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TLR9Q9NR96 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TLR9Q9NR96 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TLR9Q9NR96 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TLR9Q9NR96 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TLR9Q9NR96 KRT8P12-202ENST00000472924 1397 ntBASIC17.4■□□□□ 0.38
TLR9Q9NR96 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TLR9Q9NR96 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TLR9Q9NR96 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TLR9Q9NR96 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.38
TLR9Q9NR96 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.39■□□□□ 0.38
TLR9Q9NR96 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TLR9Q9NR96 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TLR9Q9NR96 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
TLR9Q9NR96 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TLR9Q9NR96 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TLR9Q9NR96 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.39■□□□□ 0.38
TLR9Q9NR96 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TLR9Q9NR96 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TLR9Q9NR96 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.39■□□□□ 0.37
TLR9Q9NR96 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TLR9Q9NR96 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TLR9Q9NR96 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TLR9Q9NR96 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TLR9Q9NR96 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
TLR9Q9NR96 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TLR9Q9NR96 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TLR9Q9NR96 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.39■□□□□ 0.37
TLR9Q9NR96 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
TLR9Q9NR96 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.39■□□□□ 0.37
TLR9Q9NR96 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TLR9Q9NR96 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TLR9Q9NR96 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TLR9Q9NR96 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TLR9Q9NR96 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.39■□□□□ 0.37
TLR9Q9NR96 AC112492.5-201ENST00000421897 457 ntBASIC17.39■□□□□ 0.37
TLR9Q9NR96 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.39■□□□□ 0.37
TLR9Q9NR96 AC093724.1-201ENST00000448659 1027 ntBASIC17.39■□□□□ 0.37
TLR9Q9NR96 TPRX2P-201ENST00000535362 881 ntBASIC17.39■□□□□ 0.37
TLR9Q9NR96 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.39■□□□□ 0.37
TLR9Q9NR96 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.39■□□□□ 0.37
TLR9Q9NR96 SRD5A3P1-201ENST00000603021 949 ntBASIC17.39■□□□□ 0.37
TLR9Q9NR96 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.39■□□□□ 0.37
TLR9Q9NR96 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TLR9Q9NR96 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TLR9Q9NR96 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TLR9Q9NR96 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TLR9Q9NR96 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TLR9Q9NR96 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TLR9Q9NR96 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TLR9Q9NR96 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TLR9Q9NR96 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TLR9Q9NR96 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TLR9Q9NR96 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.39■□□□□ 0.37
TLR9Q9NR96 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.39■□□□□ 0.37
TLR9Q9NR96 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TLR9Q9NR96 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TLR9Q9NR96 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.38■□□□□ 0.37
TLR9Q9NR96 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.38■□□□□ 0.37
TLR9Q9NR96 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TLR9Q9NR96 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.38■□□□□ 0.37
TLR9Q9NR96 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.38■□□□□ 0.37
TLR9Q9NR96 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.38■□□□□ 0.37
TLR9Q9NR96 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TLR9Q9NR96 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.38■□□□□ 0.37
TLR9Q9NR96 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TLR9Q9NR96 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TLR9Q9NR96 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TLR9Q9NR96 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TLR9Q9NR96 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TLR9Q9NR96 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.38■□□□□ 0.37
TLR9Q9NR96 MEP1AP4-201ENST00000423244 1087 ntBASIC17.38■□□□□ 0.37
TLR9Q9NR96 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TLR9Q9NR96 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms