Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.07■□□□□ 0.32
HPS4Q9NQG7 AC005034.1-201ENST00000426657 489 ntBASIC17.07■□□□□ 0.32
HPS4Q9NQG7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 AC027369.6-201ENST00000525520 931 ntBASIC17.07■□□□□ 0.32
HPS4Q9NQG7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 AC124947.2-201ENST00000547118 1133 ntBASIC17.07■□□□□ 0.32
HPS4Q9NQG7 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 AC012645.4-201ENST00000610691 1061 ntBASIC17.07■□□□□ 0.32
HPS4Q9NQG7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 AL590560.3-201ENST00000623350 461 ntBASIC17.07■□□□□ 0.32
HPS4Q9NQG7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HPS4Q9NQG7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 AC092053.1-201ENST00000605787 1936 ntBASIC17.06■□□□□ 0.32
HPS4Q9NQG7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 SERBP1P5-201ENST00000510079 1181 ntBASIC17.06■□□□□ 0.32
HPS4Q9NQG7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 PRYP6-201ENST00000514804 343 ntBASIC17.06■□□□□ 0.32
HPS4Q9NQG7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 AC007967.4-201ENST00000614700 386 ntBASIC17.06■□□□□ 0.32
HPS4Q9NQG7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.06■□□□□ 0.32
HPS4Q9NQG7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HPS4Q9NQG7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms