Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 OR7E47P-204ENST00000575924 449 ntBASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 PMS2P7-201ENST00000506558 1336 ntBASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 AC006449.6-201ENST00000612330 2296 ntBASIC15.63■□□□□ 0.09
NEUROD4Q9HD90 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 MIR3909-201ENST00000579518 119 ntBASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 AC022188.1-201ENST00000620960 1664 ntBASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NEUROD4Q9HD90 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
NEUROD4Q9HD90 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NEUROD4Q9HD90 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.61■□□□□ 0.09
NEUROD4Q9HD90 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NEUROD4Q9HD90 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NEUROD4Q9HD90 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.61■□□□□ 0.09
NEUROD4Q9HD90 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NEUROD4Q9HD90 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
NEUROD4Q9HD90 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NEUROD4Q9HD90 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NEUROD4Q9HD90 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NEUROD4Q9HD90 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.61■□□□□ 0.09
NEUROD4Q9HD90 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.61■□□□□ 0.09
NEUROD4Q9HD90 FAM185BP-201ENST00000443595 716 ntBASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms