Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCSER1Q9C0I3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCSER1Q9C0I3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.43■□□□□ 0.54
CCSER1Q9C0I3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCSER1Q9C0I3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CCSER1Q9C0I3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CCSER1Q9C0I3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCSER1Q9C0I3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCSER1Q9C0I3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCSER1Q9C0I3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCSER1Q9C0I3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCSER1Q9C0I3 MCCD1P2-201ENST00000423228 335 ntBASIC18.43■□□□□ 0.54
CCSER1Q9C0I3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.43■□□□□ 0.54
CCSER1Q9C0I3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.43■□□□□ 0.54
CCSER1Q9C0I3 POLD2P1-201ENST00000511220 997 ntBASIC18.43■□□□□ 0.54
CCSER1Q9C0I3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.43■□□□□ 0.54
CCSER1Q9C0I3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCSER1Q9C0I3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.43■□□□□ 0.54
CCSER1Q9C0I3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.43■□□□□ 0.54
CCSER1Q9C0I3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCSER1Q9C0I3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCSER1Q9C0I3 AC022188.1-201ENST00000620960 1664 ntBASIC18.43■□□□□ 0.54
CCSER1Q9C0I3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCSER1Q9C0I3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCSER1Q9C0I3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCSER1Q9C0I3 PKD1P1-201ENST00000458669 6805 ntBASIC18.43■□□□□ 0.54
CCSER1Q9C0I3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 AL365203.3-201ENST00000609742 2057 ntBASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 RARRES2P8-201ENST00000566335 367 ntBASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 AC091812.2-201ENST00000619081 385 ntBASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 AKAP8P1-201ENST00000434743 1349 ntBASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 PMS2P7-201ENST00000506558 1336 ntBASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCSER1Q9C0I3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 OR6D1P-203ENST00000641209 4860 ntBASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 AC024909.3-201ENST00000611513 2257 ntBASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 MIR648-201ENST00000385046 94 ntBASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 MIR940-201ENST00000401276 94 ntBASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 AC004832.2-201ENST00000426397 482 ntBASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 PRYP6-201ENST00000514804 343 ntBASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 AC073389.1-201ENST00000595595 795 ntBASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 AC092902.6-201ENST00000641783 218 ntBASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCSER1Q9C0I3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms