Protein–RNA interactions for Protein: Q9C0H5

ARHGAP39, Rho GTPase-activating protein 39, humanhuman

Predictions only

Length 1,083 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP39Q9C0H5 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
ARHGAP39Q9C0H5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARHGAP39Q9C0H5 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ARHGAP39Q9C0H5 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARHGAP39Q9C0H5 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.4■□□□□ 0.54
ARHGAP39Q9C0H5 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARHGAP39Q9C0H5 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARHGAP39Q9C0H5 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARHGAP39Q9C0H5 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARHGAP39Q9C0H5 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
ARHGAP39Q9C0H5 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARHGAP39Q9C0H5 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.4■□□□□ 0.54
ARHGAP39Q9C0H5 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
ARHGAP39Q9C0H5 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARHGAP39Q9C0H5 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.4■□□□□ 0.54
ARHGAP39Q9C0H5 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARHGAP39Q9C0H5 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARHGAP39Q9C0H5 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.4■□□□□ 0.54
ARHGAP39Q9C0H5 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARHGAP39Q9C0H5 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARHGAP39Q9C0H5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARHGAP39Q9C0H5 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.4■□□□□ 0.54
ARHGAP39Q9C0H5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
ARHGAP39Q9C0H5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARHGAP39Q9C0H5 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARHGAP39Q9C0H5 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARHGAP39Q9C0H5 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
ARHGAP39Q9C0H5 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ARHGAP39Q9C0H5 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.39■□□□□ 0.54
ARHGAP39Q9C0H5 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 Z97205.2-201ENST00000564697 1639 ntBASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 FO393414.2-201ENST00000405153 598 ntBASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 AC068587.3-201ENST00000526613 355 ntBASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 AC010328.2-201ENST00000597698 1111 ntBASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.39■□□□□ 0.53
ARHGAP39Q9C0H5 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 AC026954.1-201ENST00000429771 1293 ntBASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 FTH1P14-201ENST00000482930 551 ntBASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.38■□□□□ 0.53
ARHGAP39Q9C0H5 GPAA1P2-202ENST00000606848 1787 ntBASIC18.37■□□□□ 0.53
ARHGAP39Q9C0H5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ARHGAP39Q9C0H5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ARHGAP39Q9C0H5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARHGAP39Q9C0H5 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms