Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 AL355994.2-201ENST00000447882 704 ntBASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 AC133539.2-201ENST00000604757 467 ntBASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 AC084346.2-201ENST00000607097 949 ntBASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNTNAP4Q9C0A0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNTNAP4Q9C0A0 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.48■□□□□ 0.87
CNTNAP4Q9C0A0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
CNTNAP4Q9C0A0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNTNAP4Q9C0A0 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC20.48■□□□□ 0.87
CNTNAP4Q9C0A0 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CNTNAP4Q9C0A0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNTNAP4Q9C0A0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.48■□□□□ 0.87
CNTNAP4Q9C0A0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNTNAP4Q9C0A0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNTNAP4Q9C0A0 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNTNAP4Q9C0A0 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CNTNAP4Q9C0A0 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNTNAP4Q9C0A0 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CNTNAP4Q9C0A0 AZGP1P1-201ENST00000411909 902 ntBASIC20.48■□□□□ 0.87
CNTNAP4Q9C0A0 RNA5SP412-201ENST00000516234 123 ntBASIC20.48■□□□□ 0.87
CNTNAP4Q9C0A0 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CNTNAP4Q9C0A0 AL022328.1-201ENST00000610050 478 ntBASIC20.48■□□□□ 0.87
CNTNAP4Q9C0A0 LINC01144-201ENST00000626198 1710 ntBASIC20.48■□□□□ 0.87
CNTNAP4Q9C0A0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNTNAP4Q9C0A0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CNTNAP4Q9C0A0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNTNAP4Q9C0A0 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 AL603756.1-201ENST00000606511 2163 ntBASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 KRT8P44-201ENST00000441609 1350 ntBASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 AC074338.1-201ENST00000416825 156 ntBASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 USB1-202ENST00000423271 1217 ntTSL 2 BASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC20.47■□□□□ 0.87
CNTNAP4Q9C0A0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNTNAP4Q9C0A0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CNTNAP4Q9C0A0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNTNAP4Q9C0A0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.46■□□□□ 0.87
CNTNAP4Q9C0A0 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.46■□□□□ 0.87
CNTNAP4Q9C0A0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.46■□□□□ 0.87
CNTNAP4Q9C0A0 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC20.46■□□□□ 0.87
CNTNAP4Q9C0A0 GGT3P-204ENST00000453783 1664 ntBASIC20.46■□□□□ 0.87
CNTNAP4Q9C0A0 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNTNAP4Q9C0A0 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNTNAP4Q9C0A0 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CNTNAP4Q9C0A0 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CNTNAP4Q9C0A0 APOA1-205ENST00000375329 927 ntTSL 2 BASIC20.46■□□□□ 0.87
CNTNAP4Q9C0A0 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC20.46■□□□□ 0.87
CNTNAP4Q9C0A0 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC20.46■□□□□ 0.87
CNTNAP4Q9C0A0 FO681548.1-201ENST00000455617 1132 ntBASIC20.46■□□□□ 0.87
CNTNAP4Q9C0A0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CNTNAP4Q9C0A0 TDH-203ENST00000531764 1110 ntBASIC20.46■□□□□ 0.87
CNTNAP4Q9C0A0 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNTNAP4Q9C0A0 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC20.46■□□□□ 0.87
CNTNAP4Q9C0A0 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC20.46■□□□□ 0.87
CNTNAP4Q9C0A0 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNTNAP4Q9C0A0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
CNTNAP4Q9C0A0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CNTNAP4Q9C0A0 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CNTNAP4Q9C0A0 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CNTNAP4Q9C0A0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CNTNAP4Q9C0A0 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNTNAP4Q9C0A0 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNTNAP4Q9C0A0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms