Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 PPT1-215ENST00000641471 2368 ntBASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 AC125634.1-201ENST00000438758 1403 ntBASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 CICP13-201ENST00000422015 2789 ntBASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 AL135999.2-201ENST00000622438 1686 ntBASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 ANKRD20A18P-201ENST00000359341 492 ntBASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 AC092597.1-201ENST00000487352 616 ntBASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP4Q9BWG4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 AP005117.1-202ENST00000581724 1908 ntBASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 KRT8P10-201ENST00000450021 1447 ntBASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC12.54□□□□□ -0.4
SSBP4Q9BWG4 AL353593.2-201ENST00000602529 1483 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms