Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC12.6□□□□□ -0.39
VGLL1Q99990 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
VGLL1Q99990 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VGLL1Q99990 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VGLL1Q99990 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
VGLL1Q99990 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
VGLL1Q99990 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VGLL1Q99990 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VGLL1Q99990 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VGLL1Q99990 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
VGLL1Q99990 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.59□□□□□ -0.39
VGLL1Q99990 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.59□□□□□ -0.39
VGLL1Q99990 AC099063.4-201ENST00000641099 1602 ntBASIC12.59□□□□□ -0.39
VGLL1Q99990 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC12.59□□□□□ -0.39
VGLL1Q99990 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
VGLL1Q99990 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC12.59□□□□□ -0.39
VGLL1Q99990 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
VGLL1Q99990 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
VGLL1Q99990 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC12.59□□□□□ -0.39
VGLL1Q99990 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC12.59□□□□□ -0.39
VGLL1Q99990 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
VGLL1Q99990 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
VGLL1Q99990 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 BCL10-202ENST00000620248 774 ntTSL 5 BASIC12.59□□□□□ -0.39
VGLL1Q99990 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
VGLL1Q99990 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
VGLL1Q99990 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC12.59□□□□□ -0.39
VGLL1Q99990 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC12.59□□□□□ -0.39
VGLL1Q99990 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC12.59□□□□□ -0.39
VGLL1Q99990 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC12.59□□□□□ -0.39
VGLL1Q99990 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VGLL1Q99990 SNX33P1-201ENST00000592116 1762 ntBASIC12.58□□□□□ -0.39
VGLL1Q99990 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
VGLL1Q99990 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
VGLL1Q99990 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
VGLL1Q99990 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.58□□□□□ -0.39
VGLL1Q99990 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
VGLL1Q99990 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
VGLL1Q99990 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
VGLL1Q99990 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
VGLL1Q99990 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VGLL1Q99990 TOP3BP1-201ENST00000420768 1380 ntBASIC12.58□□□□□ -0.4
VGLL1Q99990 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VGLL1Q99990 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
VGLL1Q99990 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.58□□□□□ -0.4
VGLL1Q99990 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VGLL1Q99990 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VGLL1Q99990 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.58□□□□□ -0.4
VGLL1Q99990 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VGLL1Q99990 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
VGLL1Q99990 MBP-202ENST00000355994 2772 ntTSL 5 BASIC12.58□□□□□ -0.4
VGLL1Q99990 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
VGLL1Q99990 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VGLL1Q99990 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VGLL1Q99990 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC12.58□□□□□ -0.4
VGLL1Q99990 NCF1C-201ENST00000438382 1427 ntBASIC12.58□□□□□ -0.4
VGLL1Q99990 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.58□□□□□ -0.4
VGLL1Q99990 PRYP5-201ENST00000451909 266 ntBASIC12.58□□□□□ -0.4
VGLL1Q99990 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC12.58□□□□□ -0.4
VGLL1Q99990 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.58□□□□□ -0.4
VGLL1Q99990 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC12.58□□□□□ -0.4
VGLL1Q99990 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC12.58□□□□□ -0.4
VGLL1Q99990 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC12.58□□□□□ -0.4
VGLL1Q99990 AP005117.1-201ENST00000584346 1413 ntBASIC12.58□□□□□ -0.4
VGLL1Q99990 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VGLL1Q99990 AP001269.4-201ENST00000609611 512 ntBASIC12.58□□□□□ -0.4
VGLL1Q99990 AL512652.2-201ENST00000625156 1716 ntBASIC12.58□□□□□ -0.4
VGLL1Q99990 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.58□□□□□ -0.4
VGLL1Q99990 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
VGLL1Q99990 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VGLL1Q99990 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
VGLL1Q99990 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.58□□□□□ -0.4
VGLL1Q99990 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 552.6 ms