Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMOQ99835 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.24■□□□□ 0.35
SMOQ99835 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMOQ99835 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMOQ99835 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SMOQ99835 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
SMOQ99835 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.24■□□□□ 0.35
SMOQ99835 FAM86GP-201ENST00000448322 971 ntBASIC17.24■□□□□ 0.35
SMOQ99835 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.24■□□□□ 0.35
SMOQ99835 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SMOQ99835 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.24■□□□□ 0.35
SMOQ99835 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.24■□□□□ 0.35
SMOQ99835 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.24■□□□□ 0.35
SMOQ99835 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMOQ99835 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMOQ99835 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
SMOQ99835 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
SMOQ99835 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMOQ99835 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.24■□□□□ 0.35
SMOQ99835 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMOQ99835 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SMOQ99835 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMOQ99835 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMOQ99835 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMOQ99835 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMOQ99835 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SMOQ99835 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.24■□□□□ 0.35
SMOQ99835 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SMOQ99835 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.24■□□□□ 0.35
SMOQ99835 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SMOQ99835 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMOQ99835 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.24■□□□□ 0.35
SMOQ99835 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMOQ99835 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMOQ99835 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMOQ99835 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SMOQ99835 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SMOQ99835 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMOQ99835 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.23■□□□□ 0.35
SMOQ99835 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.23■□□□□ 0.35
SMOQ99835 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMOQ99835 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMOQ99835 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMOQ99835 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SMOQ99835 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SMOQ99835 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.23■□□□□ 0.35
SMOQ99835 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMOQ99835 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.23■□□□□ 0.35
SMOQ99835 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.23■□□□□ 0.35
SMOQ99835 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SMOQ99835 DUX4L27-201ENST00000554796 1261 ntBASIC17.23■□□□□ 0.35
SMOQ99835 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.23■□□□□ 0.35
SMOQ99835 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.23■□□□□ 0.35
SMOQ99835 AC061975.2-201ENST00000581722 295 ntBASIC17.23■□□□□ 0.35
SMOQ99835 AL355385.1-201ENST00000606123 409 ntBASIC17.23■□□□□ 0.35
SMOQ99835 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.23■□□□□ 0.35
SMOQ99835 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMOQ99835 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMOQ99835 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SMOQ99835 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMOQ99835 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMOQ99835 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.23■□□□□ 0.35
SMOQ99835 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMOQ99835 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMOQ99835 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMOQ99835 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMOQ99835 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SMOQ99835 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMOQ99835 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.22■□□□□ 0.35
SMOQ99835 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SMOQ99835 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMOQ99835 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
SMOQ99835 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.22■□□□□ 0.35
SMOQ99835 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.22■□□□□ 0.35
SMOQ99835 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMOQ99835 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SMOQ99835 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMOQ99835 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SMOQ99835 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SMOQ99835 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.22■□□□□ 0.35
SMOQ99835 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMOQ99835 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SMOQ99835 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMOQ99835 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMOQ99835 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMOQ99835 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMOQ99835 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.22■□□□□ 0.35
SMOQ99835 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMOQ99835 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.22■□□□□ 0.35
SMOQ99835 AC067863.1-201ENST00000494933 530 ntBASIC17.22■□□□□ 0.35
SMOQ99835 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.22■□□□□ 0.35
SMOQ99835 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.22■□□□□ 0.35
SMOQ99835 AC003101.2-201ENST00000612557 442 ntBASIC17.22■□□□□ 0.35
SMOQ99835 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMOQ99835 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.22■□□□□ 0.35
SMOQ99835 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMOQ99835 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
SMOQ99835 U82695.1-201ENST00000635752 1889 ntBASIC17.22■□□□□ 0.35
SMOQ99835 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMOQ99835 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms