Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.54■□□□□ 0.72
NEK1Q96PY6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
NEK1Q96PY6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEK1Q96PY6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEK1Q96PY6 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEK1Q96PY6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEK1Q96PY6 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEK1Q96PY6 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NEK1Q96PY6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NEK1Q96PY6 PCDHA1-201ENST00000378133 2726 ntBASIC19.53■□□□□ 0.72
NEK1Q96PY6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NEK1Q96PY6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.53■□□□□ 0.72
NEK1Q96PY6 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
NEK1Q96PY6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NEK1Q96PY6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NEK1Q96PY6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NEK1Q96PY6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NEK1Q96PY6 AC016027.1-202ENST00000607927 1699 ntBASIC19.53■□□□□ 0.72
NEK1Q96PY6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.53■□□□□ 0.72
NEK1Q96PY6 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NEK1Q96PY6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
NEK1Q96PY6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.53■□□□□ 0.72
NEK1Q96PY6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.53■□□□□ 0.72
NEK1Q96PY6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NEK1Q96PY6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NEK1Q96PY6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NEK1Q96PY6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NEK1Q96PY6 MIR574-201ENST00000385209 96 ntBASIC19.53■□□□□ 0.72
NEK1Q96PY6 MIR940-201ENST00000401276 94 ntBASIC19.53■□□□□ 0.72
NEK1Q96PY6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.53■□□□□ 0.72
NEK1Q96PY6 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.53■□□□□ 0.72
NEK1Q96PY6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NEK1Q96PY6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.53■□□□□ 0.72
NEK1Q96PY6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.53■□□□□ 0.72
NEK1Q96PY6 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.53■□□□□ 0.72
NEK1Q96PY6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
NEK1Q96PY6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.53■□□□□ 0.72
NEK1Q96PY6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NEK1Q96PY6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NEK1Q96PY6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.53■□□□□ 0.72
NEK1Q96PY6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.53■□□□□ 0.72
NEK1Q96PY6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
NEK1Q96PY6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NEK1Q96PY6 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NEK1Q96PY6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NEK1Q96PY6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NEK1Q96PY6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
NEK1Q96PY6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
NEK1Q96PY6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
NEK1Q96PY6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.52■□□□□ 0.72
NEK1Q96PY6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
NEK1Q96PY6 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NEK1Q96PY6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NEK1Q96PY6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
NEK1Q96PY6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
NEK1Q96PY6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NEK1Q96PY6 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
NEK1Q96PY6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.52■□□□□ 0.72
NEK1Q96PY6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NEK1Q96PY6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NEK1Q96PY6 AC023274.1-201ENST00000418278 595 ntBASIC19.52■□□□□ 0.72
NEK1Q96PY6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.52■□□□□ 0.72
NEK1Q96PY6 KRT18P34-201ENST00000488218 1270 ntBASIC19.52■□□□□ 0.72
NEK1Q96PY6 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.52■□□□□ 0.72
NEK1Q96PY6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.52■□□□□ 0.72
NEK1Q96PY6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
NEK1Q96PY6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NEK1Q96PY6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.52■□□□□ 0.72
NEK1Q96PY6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.52■□□□□ 0.71
NEK1Q96PY6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.52■□□□□ 0.71
NEK1Q96PY6 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
NEK1Q96PY6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NEK1Q96PY6 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NEK1Q96PY6 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NEK1Q96PY6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NEK1Q96PY6 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NEK1Q96PY6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
NEK1Q96PY6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NEK1Q96PY6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
NEK1Q96PY6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NEK1Q96PY6 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NEK1Q96PY6 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.51■□□□□ 0.71
NEK1Q96PY6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NEK1Q96PY6 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.51■□□□□ 0.71
NEK1Q96PY6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NEK1Q96PY6 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.51■□□□□ 0.71
NEK1Q96PY6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
NEK1Q96PY6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NEK1Q96PY6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NEK1Q96PY6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
NEK1Q96PY6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
NEK1Q96PY6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.51■□□□□ 0.71
NEK1Q96PY6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
NEK1Q96PY6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NEK1Q96PY6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.51■□□□□ 0.71
NEK1Q96PY6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
NEK1Q96PY6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.51■□□□□ 0.71
NEK1Q96PY6 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NEK1Q96PY6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NEK1Q96PY6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms