Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 AL009183.1-201ENST00000603760 355 ntBASIC15.43■□□□□ 0.06
MS4A4EQ96PG1 AC120114.3-201ENST00000611923 658 ntBASIC15.43■□□□□ 0.06
MS4A4EQ96PG1 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.43■□□□□ 0.06
MS4A4EQ96PG1 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MS4A4EQ96PG1 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
MS4A4EQ96PG1 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.43■□□□□ 0.06
MS4A4EQ96PG1 AC006449.6-201ENST00000612330 2296 ntBASIC15.43■□□□□ 0.06
MS4A4EQ96PG1 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MS4A4EQ96PG1 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MS4A4EQ96PG1 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MS4A4EQ96PG1 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
MS4A4EQ96PG1 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
MS4A4EQ96PG1 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MS4A4EQ96PG1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MS4A4EQ96PG1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
MS4A4EQ96PG1 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
MS4A4EQ96PG1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 AC004877.2-201ENST00000623941 599 ntBASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 AC025580.3-201ENST00000617932 1424 ntBASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
MS4A4EQ96PG1 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 AL162727.3-201ENST00000635661 2787 ntBASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 AC140658.5-201ENST00000438532 169 ntBASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 AL591424.1-201ENST00000442569 1213 ntBASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 KRT19P2-202ENST00000557173 1012 ntBASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.41■□□□□ 0.06
MS4A4EQ96PG1 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms