Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
USP6NLQ92738 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
USP6NLQ92738 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP6NLQ92738 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP6NLQ92738 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
USP6NLQ92738 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
USP6NLQ92738 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP6NLQ92738 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP6NLQ92738 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.56■□□□□ 0.56
USP6NLQ92738 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP6NLQ92738 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP6NLQ92738 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP6NLQ92738 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP6NLQ92738 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP6NLQ92738 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.56■□□□□ 0.56
USP6NLQ92738 TMEM14DP-201ENST00000422205 345 ntBASIC18.56■□□□□ 0.56
USP6NLQ92738 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP6NLQ92738 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.56■□□□□ 0.56
USP6NLQ92738 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.56■□□□□ 0.56
USP6NLQ92738 AC123567.1-201ENST00000548294 1261 ntBASIC18.56■□□□□ 0.56
USP6NLQ92738 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
USP6NLQ92738 AL109936.8-201ENST00000641772 604 ntBASIC18.56■□□□□ 0.56
USP6NLQ92738 AL139011.1-202ENST00000642063 584 ntBASIC18.56■□□□□ 0.56
USP6NLQ92738 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP6NLQ92738 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.56■□□□□ 0.56
USP6NLQ92738 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
USP6NLQ92738 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.56■□□□□ 0.56
USP6NLQ92738 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.56■□□□□ 0.56
USP6NLQ92738 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
USP6NLQ92738 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP6NLQ92738 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP6NLQ92738 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP6NLQ92738 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
USP6NLQ92738 BCL2-203ENST00000589955 5011 ntBASIC18.55■□□□□ 0.56
USP6NLQ92738 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP6NLQ92738 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP6NLQ92738 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
USP6NLQ92738 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP6NLQ92738 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.55■□□□□ 0.56
USP6NLQ92738 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.55■□□□□ 0.56
USP6NLQ92738 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP6NLQ92738 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP6NLQ92738 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP6NLQ92738 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP6NLQ92738 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP6NLQ92738 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.55■□□□□ 0.56
USP6NLQ92738 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.55■□□□□ 0.56
USP6NLQ92738 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.55■□□□□ 0.56
USP6NLQ92738 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.55■□□□□ 0.56
USP6NLQ92738 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
USP6NLQ92738 AC092337.1-201ENST00000568699 1129 ntBASIC18.55■□□□□ 0.56
USP6NLQ92738 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
USP6NLQ92738 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.55■□□□□ 0.56
USP6NLQ92738 AC026979.3-201ENST00000607315 403 ntBASIC18.55■□□□□ 0.56
USP6NLQ92738 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.55■□□□□ 0.56
USP6NLQ92738 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.55■□□□□ 0.56
USP6NLQ92738 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.55■□□□□ 0.56
USP6NLQ92738 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP6NLQ92738 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP6NLQ92738 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP6NLQ92738 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.55■□□□□ 0.56
USP6NLQ92738 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP6NLQ92738 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.55■□□□□ 0.56
USP6NLQ92738 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
USP6NLQ92738 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP6NLQ92738 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP6NLQ92738 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP6NLQ92738 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP6NLQ92738 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.54■□□□□ 0.56
USP6NLQ92738 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.54■□□□□ 0.56
USP6NLQ92738 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.54■□□□□ 0.56
USP6NLQ92738 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.54■□□□□ 0.56
USP6NLQ92738 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP6NLQ92738 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
USP6NLQ92738 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
USP6NLQ92738 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.54■□□□□ 0.56
USP6NLQ92738 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
USP6NLQ92738 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.54■□□□□ 0.56
USP6NLQ92738 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.54■□□□□ 0.56
USP6NLQ92738 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.54■□□□□ 0.56
USP6NLQ92738 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.54■□□□□ 0.56
USP6NLQ92738 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.54■□□□□ 0.56
USP6NLQ92738 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.54■□□□□ 0.56
USP6NLQ92738 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.54■□□□□ 0.56
USP6NLQ92738 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.54■□□□□ 0.56
USP6NLQ92738 AC093726.1-201ENST00000608064 963 ntBASIC18.54■□□□□ 0.56
USP6NLQ92738 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP6NLQ92738 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP6NLQ92738 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.54■□□□□ 0.56
USP6NLQ92738 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP6NLQ92738 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP6NLQ92738 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP6NLQ92738 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP6NLQ92738 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
USP6NLQ92738 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP6NLQ92738 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP6NLQ92738 AC106820.2-201ENST00000563775 3264 ntBASIC18.54■□□□□ 0.56
USP6NLQ92738 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP6NLQ92738 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP6NLQ92738 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms