Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.81□□□□□ -0.04
RNF138Q8WVD3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
RNF138Q8WVD3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF138Q8WVD3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF138Q8WVD3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF138Q8WVD3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RNF138Q8WVD3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF138Q8WVD3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 PCDHB19P-201ENST00000570871 2371 ntBASIC14.8□□□□□ -0.04
RNF138Q8WVD3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 SPDYE17-201ENST00000412399 783 ntBASIC14.8□□□□□ -0.04
RNF138Q8WVD3 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.8□□□□□ -0.04
RNF138Q8WVD3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 AC067863.1-201ENST00000494933 530 ntBASIC14.8□□□□□ -0.04
RNF138Q8WVD3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 AC004449.1-201ENST00000564240 433 ntBASIC14.8□□□□□ -0.04
RNF138Q8WVD3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.8□□□□□ -0.04
RNF138Q8WVD3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 TUBB3P1-201ENST00000405796 1332 ntBASIC14.79□□□□□ -0.04
RNF138Q8WVD3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 AL645939.2-201ENST00000427340 991 ntBASIC14.79□□□□□ -0.04
RNF138Q8WVD3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 AC026979.3-201ENST00000607315 403 ntBASIC14.79□□□□□ -0.04
RNF138Q8WVD3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF138Q8WVD3 AC092364.2-201ENST00000596710 2692 ntBASIC14.79□□□□□ -0.04
RNF138Q8WVD3 BCL2-203ENST00000589955 5011 ntBASIC14.78□□□□□ -0.04
RNF138Q8WVD3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms