Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 WASH4P-201ENST00000564273 1246 ntBASIC28.1■■■□□ 2.09
TRIM41Q8WV44 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
TRIM41Q8WV44 AC016629.1-201ENST00000596579 586 ntBASIC28.1■■■□□ 2.09
TRIM41Q8WV44 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TRIM41Q8WV44 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC28.1■■■□□ 2.09
TRIM41Q8WV44 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TRIM41Q8WV44 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TRIM41Q8WV44 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
TRIM41Q8WV44 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
TRIM41Q8WV44 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC28.1■■■□□ 2.09
TRIM41Q8WV44 RNF216P1-203ENST00000404404 2427 ntBASIC28.1■■■□□ 2.09
TRIM41Q8WV44 AL603756.1-201ENST00000606511 2163 ntBASIC28.1■■■□□ 2.09
TRIM41Q8WV44 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
TRIM41Q8WV44 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TRIM41Q8WV44 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
TRIM41Q8WV44 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TRIM41Q8WV44 AL512652.2-201ENST00000625156 1716 ntBASIC28.09■■■□□ 2.09
TRIM41Q8WV44 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC28.09■■■□□ 2.09
TRIM41Q8WV44 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC28.09■■■□□ 2.09
TRIM41Q8WV44 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
TRIM41Q8WV44 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC28.09■■■□□ 2.09
TRIM41Q8WV44 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
TRIM41Q8WV44 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC28.09■■■□□ 2.09
TRIM41Q8WV44 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC28.09■■■□□ 2.09
TRIM41Q8WV44 AP002490.2-201ENST00000524791 560 ntBASIC28.09■■■□□ 2.09
TRIM41Q8WV44 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC28.09■■■□□ 2.09
TRIM41Q8WV44 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC28.09■■■□□ 2.09
TRIM41Q8WV44 AL583810.1-201ENST00000553344 1045 ntBASIC28.09■■■□□ 2.09
TRIM41Q8WV44 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC28.09■■■□□ 2.09
TRIM41Q8WV44 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC28.09■■■□□ 2.09
TRIM41Q8WV44 AL138828.2-201ENST00000615812 383 ntBASIC28.09■■■□□ 2.09
TRIM41Q8WV44 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC28.09■■■□□ 2.09
TRIM41Q8WV44 AL139011.1-202ENST00000642063 584 ntBASIC28.09■■■□□ 2.09
TRIM41Q8WV44 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
TRIM41Q8WV44 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC28.09■■■□□ 2.09
TRIM41Q8WV44 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TRIM41Q8WV44 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
TRIM41Q8WV44 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TRIM41Q8WV44 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC28.09■■■□□ 2.09
TRIM41Q8WV44 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC28.09■■■□□ 2.09
TRIM41Q8WV44 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
TRIM41Q8WV44 NARF-206ENST00000457415 1668 ntTSL 5 BASIC28.09■■■□□ 2.09
TRIM41Q8WV44 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC28.09■■■□□ 2.09
TRIM41Q8WV44 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
TRIM41Q8WV44 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TRIM41Q8WV44 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC28.08■■■□□ 2.09
TRIM41Q8WV44 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC28.08■■■□□ 2.09
TRIM41Q8WV44 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC28.08■■■□□ 2.09
TRIM41Q8WV44 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
TRIM41Q8WV44 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TRIM41Q8WV44 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
TRIM41Q8WV44 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
TRIM41Q8WV44 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TRIM41Q8WV44 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC28.08■■■□□ 2.09
TRIM41Q8WV44 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC28.08■■■□□ 2.09
TRIM41Q8WV44 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC28.08■■■□□ 2.09
TRIM41Q8WV44 MIR4722-201ENST00000578292 60 ntBASIC28.08■■■□□ 2.09
TRIM41Q8WV44 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TRIM41Q8WV44 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.09
TRIM41Q8WV44 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.08
TRIM41Q8WV44 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
TRIM41Q8WV44 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
TRIM41Q8WV44 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
TRIM41Q8WV44 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
TRIM41Q8WV44 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC28.07■■■□□ 2.08
TRIM41Q8WV44 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC28.07■■■□□ 2.08
TRIM41Q8WV44 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC28.07■■■□□ 2.08
TRIM41Q8WV44 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC28.07■■■□□ 2.08
TRIM41Q8WV44 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
TRIM41Q8WV44 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
TRIM41Q8WV44 ANKRD19P-201ENST00000338192 862 ntBASIC28.07■■■□□ 2.08
TRIM41Q8WV44 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
TRIM41Q8WV44 GGCT-203ENST00000409144 836 ntTSL 2 BASIC28.07■■■□□ 2.08
TRIM41Q8WV44 HIST1H2BPS3-201ENST00000419683 341 ntBASIC28.07■■■□□ 2.08
TRIM41Q8WV44 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC28.07■■■□□ 2.08
TRIM41Q8WV44 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
TRIM41Q8WV44 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
TRIM41Q8WV44 MPI-209ENST00000564003 1195 ntTSL 2 BASIC28.07■■■□□ 2.08
TRIM41Q8WV44 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
TRIM41Q8WV44 AL021578.1-201ENST00000613646 709 ntBASIC28.07■■■□□ 2.08
TRIM41Q8WV44 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC28.07■■■□□ 2.08
TRIM41Q8WV44 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC28.07■■■□□ 2.08
TRIM41Q8WV44 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC28.07■■■□□ 2.08
TRIM41Q8WV44 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC28.07■■■□□ 2.08
TRIM41Q8WV44 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC28.07■■■□□ 2.08
TRIM41Q8WV44 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC28.06■■■□□ 2.08
TRIM41Q8WV44 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC28.06■■■□□ 2.08
TRIM41Q8WV44 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC28.06■■■□□ 2.08
TRIM41Q8WV44 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC28.06■■■□□ 2.08
TRIM41Q8WV44 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC28.06■■■□□ 2.08
TRIM41Q8WV44 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
TRIM41Q8WV44 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
TRIM41Q8WV44 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC28.06■■■□□ 2.08
TRIM41Q8WV44 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
TRIM41Q8WV44 RN7SL837P-201ENST00000463010 287 ntBASIC28.06■■■□□ 2.08
TRIM41Q8WV44 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC28.06■■■□□ 2.08
TRIM41Q8WV44 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC28.06■■■□□ 2.08
TRIM41Q8WV44 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC28.06■■■□□ 2.08
TRIM41Q8WV44 IGHV3-62-201ENST00000520057 340 ntBASIC28.06■■■□□ 2.08
TRIM41Q8WV44 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC28.06■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms