Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.79■□□□□ 0.28
SHROOM3Q8TF72 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.79■□□□□ 0.28
SHROOM3Q8TF72 AC105233.2-201ENST00000523697 349 ntBASIC16.79■□□□□ 0.28
SHROOM3Q8TF72 AF228730.5-201ENST00000530288 346 ntBASIC16.79■□□□□ 0.28
SHROOM3Q8TF72 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.79■□□□□ 0.28
SHROOM3Q8TF72 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.79■□□□□ 0.28
SHROOM3Q8TF72 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.79■□□□□ 0.28
SHROOM3Q8TF72 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.79■□□□□ 0.28
SHROOM3Q8TF72 AC021097.1-201ENST00000607902 574 ntBASIC16.79■□□□□ 0.28
SHROOM3Q8TF72 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.79■□□□□ 0.28
SHROOM3Q8TF72 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHROOM3Q8TF72 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SHROOM3Q8TF72 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.79■□□□□ 0.28
SHROOM3Q8TF72 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHROOM3Q8TF72 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SHROOM3Q8TF72 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHROOM3Q8TF72 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHROOM3Q8TF72 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.79■□□□□ 0.28
SHROOM3Q8TF72 AC005622.1-201ENST00000636801 1703 ntBASIC16.79■□□□□ 0.28
SHROOM3Q8TF72 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHROOM3Q8TF72 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHROOM3Q8TF72 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 AC074386.1-202ENST00000463561 864 ntBASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 AC022145.2-201ENST00000598203 171 ntBASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 AL365330.1-201ENST00000607459 531 ntBASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 AL391005.1-201ENST00000623953 2435 ntBASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 AL513523.2-202ENST00000427283 2040 ntBASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHROOM3Q8TF72 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SHROOM3Q8TF72 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.77■□□□□ 0.28
SHROOM3Q8TF72 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SHROOM3Q8TF72 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SHROOM3Q8TF72 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.77■□□□□ 0.28
SHROOM3Q8TF72 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SHROOM3Q8TF72 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SHROOM3Q8TF72 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SHROOM3Q8TF72 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SHROOM3Q8TF72 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.77■□□□□ 0.28
SHROOM3Q8TF72 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.77■□□□□ 0.28
SHROOM3Q8TF72 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.77■□□□□ 0.28
SHROOM3Q8TF72 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.77■□□□□ 0.28
SHROOM3Q8TF72 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.77■□□□□ 0.28
SHROOM3Q8TF72 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.77■□□□□ 0.28
SHROOM3Q8TF72 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
SHROOM3Q8TF72 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.77■□□□□ 0.28
SHROOM3Q8TF72 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.77■□□□□ 0.28
SHROOM3Q8TF72 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.77■□□□□ 0.28
SHROOM3Q8TF72 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SHROOM3Q8TF72 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.77■□□□□ 0.28
SHROOM3Q8TF72 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SHROOM3Q8TF72 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms