Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC10.9□□□□□ -0.67
ALMS1Q8TCU4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC10.9□□□□□ -0.67
ALMS1Q8TCU4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
ALMS1Q8TCU4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.67
ALMS1Q8TCU4 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
ALMS1Q8TCU4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
ALMS1Q8TCU4 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
ALMS1Q8TCU4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC10.9□□□□□ -0.67
ALMS1Q8TCU4 HNRNPA1P32-201ENST00000396326 963 ntBASIC10.9□□□□□ -0.67
ALMS1Q8TCU4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC10.9□□□□□ -0.67
ALMS1Q8TCU4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
ALMS1Q8TCU4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.67
ALMS1Q8TCU4 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
ALMS1Q8TCU4 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
ALMS1Q8TCU4 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
ALMS1Q8TCU4 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC10.9□□□□□ -0.67
ALMS1Q8TCU4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC10.9□□□□□ -0.67
ALMS1Q8TCU4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC10.9□□□□□ -0.67
ALMS1Q8TCU4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.67
ALMS1Q8TCU4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
ALMS1Q8TCU4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.67
ALMS1Q8TCU4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC10.9□□□□□ -0.67
ALMS1Q8TCU4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC10.9□□□□□ -0.67
ALMS1Q8TCU4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 AC016396.2-201ENST00000562575 1417 ntBASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 HARS-202ENST00000415192 1401 ntTSL 2 BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 NKAIN1P1-201ENST00000435754 582 ntBASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 EEF1DP4-201ENST00000446006 880 ntBASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 AL662890.1-201ENST00000396818 632 ntBASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 SPTLC1P5-201ENST00000450718 252 ntBASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 AL096828.3-201ENST00000615354 462 ntBASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ALMS1Q8TCU4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 AC026740.1-201ENST00000607068 791 ntBASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 AC007613.1-201ENST00000572811 2597 ntBASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 AKR7A2P1-201ENST00000460134 915 ntBASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 HNRNPA1P48-202ENST00000565308 961 ntBASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 MIR4321-201ENST00000592276 80 ntBASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms