Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 AC009078.2-202ENST00000463353 338 ntBASIC16.83■□□□□ 0.28
CFAP61Q8NHU2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.83■□□□□ 0.28
CFAP61Q8NHU2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.83■□□□□ 0.28
CFAP61Q8NHU2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CFAP61Q8NHU2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CFAP61Q8NHU2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.83■□□□□ 0.28
CFAP61Q8NHU2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CFAP61Q8NHU2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.83■□□□□ 0.28
CFAP61Q8NHU2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.83■□□□□ 0.28
CFAP61Q8NHU2 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.83■□□□□ 0.28
CFAP61Q8NHU2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.83■□□□□ 0.28
CFAP61Q8NHU2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CFAP61Q8NHU2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.83■□□□□ 0.28
CFAP61Q8NHU2 AC107918.4-202ENST00000641623 219 ntBASIC16.83■□□□□ 0.28
CFAP61Q8NHU2 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CFAP61Q8NHU2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CFAP61Q8NHU2 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CFAP61Q8NHU2 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CFAP61Q8NHU2 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CFAP61Q8NHU2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CFAP61Q8NHU2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CFAP61Q8NHU2 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CFAP61Q8NHU2 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 AL353135.1-201ENST00000606729 504 ntBASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 AL139424.1-201ENST00000607572 797 ntBASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.82■□□□□ 0.28
CFAP61Q8NHU2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 LAGE3P1-201ENST00000425356 484 ntBASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 AC018712.1-201ENST00000455767 687 ntBASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 AL773604.1-201ENST00000617417 272 ntBASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 AC006504.4-201ENST00000592118 1568 ntBASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP61Q8NHU2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms