Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 KRT18P34-201ENST00000488218 1270 ntBASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 PCDH8P1-201ENST00000428983 2773 ntBASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT4Q8N9R6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 AC006449.6-201ENST00000612330 2296 ntBASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 AL513523.2-202ENST00000427283 2040 ntBASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 AL161645.1-201ENST00000622716 1255 ntBASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.34■□□□□ 0.05
CDRT4Q8N9R6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDRT4Q8N9R6 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
CDRT4Q8N9R6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.33■□□□□ 0.05
CDRT4Q8N9R6 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDRT4Q8N9R6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.33■□□□□ 0.05
CDRT4Q8N9R6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
CDRT4Q8N9R6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
CDRT4Q8N9R6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDRT4Q8N9R6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDRT4Q8N9R6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDRT4Q8N9R6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.33■□□□□ 0.04
CDRT4Q8N9R6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.33■□□□□ 0.04
CDRT4Q8N9R6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CDRT4Q8N9R6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.33■□□□□ 0.04
CDRT4Q8N9R6 AC002056.1-201ENST00000395613 760 ntBASIC15.33■□□□□ 0.04
CDRT4Q8N9R6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms