Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB42Q8N4Z0 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
RAB42Q8N4Z0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
RAB42Q8N4Z0 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB42Q8N4Z0 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
RAB42Q8N4Z0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB42Q8N4Z0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RAB42Q8N4Z0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
RAB42Q8N4Z0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.09■□□□□ 0.17
RAB42Q8N4Z0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.09■□□□□ 0.17
RAB42Q8N4Z0 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB42Q8N4Z0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB42Q8N4Z0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.08■□□□□ 0.17
RAB42Q8N4Z0 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
RAB42Q8N4Z0 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RAB42Q8N4Z0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RAB42Q8N4Z0 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RAB42Q8N4Z0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.17
RAB42Q8N4Z0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
RAB42Q8N4Z0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB42Q8N4Z0 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB42Q8N4Z0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB42Q8N4Z0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB42Q8N4Z0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.08■□□□□ 0.16
RAB42Q8N4Z0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.08■□□□□ 0.16
RAB42Q8N4Z0 GPX1P2-201ENST00000429271 606 ntBASIC16.08■□□□□ 0.16
RAB42Q8N4Z0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RAB42Q8N4Z0 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.08■□□□□ 0.16
RAB42Q8N4Z0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.08■□□□□ 0.16
RAB42Q8N4Z0 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.08■□□□□ 0.16
RAB42Q8N4Z0 AC010327.4-202ENST00000591484 748 ntBASIC16.08■□□□□ 0.16
RAB42Q8N4Z0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.08■□□□□ 0.16
RAB42Q8N4Z0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.08■□□□□ 0.16
RAB42Q8N4Z0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
RAB42Q8N4Z0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAB42Q8N4Z0 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAB42Q8N4Z0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.08■□□□□ 0.16
RAB42Q8N4Z0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB42Q8N4Z0 PCDHA12-202ENST00000613593 2588 ntBASIC16.08■□□□□ 0.16
RAB42Q8N4Z0 AC011676.5-201ENST00000624864 2660 ntBASIC16.08■□□□□ 0.16
RAB42Q8N4Z0 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
RAB42Q8N4Z0 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.08■□□□□ 0.16
RAB42Q8N4Z0 GGT3P-204ENST00000453783 1664 ntBASIC16.08■□□□□ 0.16
RAB42Q8N4Z0 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB42Q8N4Z0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.08■□□□□ 0.16
RAB42Q8N4Z0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB42Q8N4Z0 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 AL355306.1-201ENST00000415580 579 ntBASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 SPDYE11-202ENST00000450699 704 ntBASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 CEND1P1-201ENST00000451006 455 ntBASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 SPDYE9P-201ENST00000570642 692 ntBASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 SPDYE10P-202ENST00000612005 668 ntBASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 SPDYE8P-202ENST00000612377 668 ntBASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 AC016027.1-202ENST00000607927 1699 ntBASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 ELL2P1-201ENST00000413990 1906 ntBASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RAB42Q8N4Z0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms