Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 AC023310.3-201ENST00000557027 670 ntBASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 AC100756.1-201ENST00000562736 682 ntBASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 AC138749.3-201ENST00000567691 622 ntBASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 AC106886.1-201ENST00000568660 600 ntBASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 AC116165.1-201ENST00000611806 668 ntBASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 AC060834.1-201ENST00000443027 2032 ntBASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 AC006538.1-201ENST00000567905 1585 ntBASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 ACA64.2-201ENST00000459014 129 ntBASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NPAS4Q8IUM7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 AL589987.1-201ENST00000453380 819 ntBASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 AC123567.1-201ENST00000548294 1261 ntBASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 AC092337.1-201ENST00000568699 1129 ntBASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 AC093726.1-201ENST00000608064 963 ntBASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS4Q8IUM7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.52■□□□□ 0.4
NPAS4Q8IUM7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.52■□□□□ 0.4
NPAS4Q8IUM7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
NPAS4Q8IUM7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
NPAS4Q8IUM7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms