Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL23A1Q86Y22 ZBTB12BP-201ENST00000314232 1122 ntBASIC20.4■□□□□ 0.86
COL23A1Q86Y22 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
COL23A1Q86Y22 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC20.4■□□□□ 0.86
COL23A1Q86Y22 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL23A1Q86Y22 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC20.4■□□□□ 0.86
COL23A1Q86Y22 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC20.4■□□□□ 0.86
COL23A1Q86Y22 RPL13P2-201ENST00000440687 659 ntBASIC20.4■□□□□ 0.86
COL23A1Q86Y22 AL355864.2-201ENST00000447420 863 ntBASIC20.4■□□□□ 0.86
COL23A1Q86Y22 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL23A1Q86Y22 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL23A1Q86Y22 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC20.4■□□□□ 0.86
COL23A1Q86Y22 ENPP7P5-201ENST00000541031 1031 ntBASIC20.4■□□□□ 0.86
COL23A1Q86Y22 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC20.4■□□□□ 0.86
COL23A1Q86Y22 AC124283.3-201ENST00000570869 594 ntBASIC20.4■□□□□ 0.86
COL23A1Q86Y22 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC20.4■□□□□ 0.86
COL23A1Q86Y22 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
COL23A1Q86Y22 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL23A1Q86Y22 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL23A1Q86Y22 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
COL23A1Q86Y22 AL138688.1-201ENST00000624851 1594 ntBASIC20.4■□□□□ 0.86
COL23A1Q86Y22 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
COL23A1Q86Y22 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL23A1Q86Y22 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
COL23A1Q86Y22 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL23A1Q86Y22 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL23A1Q86Y22 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC20.39■□□□□ 0.86
COL23A1Q86Y22 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL23A1Q86Y22 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL23A1Q86Y22 MSTO2P-201ENST00000314835 1709 ntBASIC20.39■□□□□ 0.86
COL23A1Q86Y22 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.39■□□□□ 0.86
COL23A1Q86Y22 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL23A1Q86Y22 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL23A1Q86Y22 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL23A1Q86Y22 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL23A1Q86Y22 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL23A1Q86Y22 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL23A1Q86Y22 MIR663B-201ENST00000408361 115 ntBASIC20.39■□□□□ 0.85
COL23A1Q86Y22 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL23A1Q86Y22 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC20.39■□□□□ 0.85
COL23A1Q86Y22 COG4-212ENST00000564653 590 ntTSL 5 BASIC20.39■□□□□ 0.85
COL23A1Q86Y22 DUX4L45-201ENST00000566406 1057 ntBASIC20.39■□□□□ 0.85
COL23A1Q86Y22 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC20.39■□□□□ 0.85
COL23A1Q86Y22 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC20.39■□□□□ 0.85
COL23A1Q86Y22 PAM16-215ENST00000577031 548 ntTSL 4 BASIC20.39■□□□□ 0.85
COL23A1Q86Y22 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL23A1Q86Y22 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL23A1Q86Y22 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL23A1Q86Y22 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL23A1Q86Y22 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.39■□□□□ 0.85
COL23A1Q86Y22 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL23A1Q86Y22 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
COL23A1Q86Y22 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.39■□□□□ 0.85
COL23A1Q86Y22 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.39■□□□□ 0.85
COL23A1Q86Y22 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
COL23A1Q86Y22 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.39■□□□□ 0.85
COL23A1Q86Y22 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC20.39■□□□□ 0.85
COL23A1Q86Y22 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 CALR4P-201ENST00000431943 946 ntBASIC20.38■□□□□ 0.85
COL23A1Q86Y22 AC016694.1-201ENST00000434179 700 ntBASIC20.38■□□□□ 0.85
COL23A1Q86Y22 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 CLUHP6-201ENST00000580789 941 ntBASIC20.38■□□□□ 0.85
COL23A1Q86Y22 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 ATF5-205ENST00000600336 682 ntTSL 2 BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 ABBA01031663.1-201ENST00000635630 790 ntBASIC20.38■□□□□ 0.85
COL23A1Q86Y22 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
COL23A1Q86Y22 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
COL23A1Q86Y22 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL23A1Q86Y22 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL23A1Q86Y22 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC20.37■□□□□ 0.85
COL23A1Q86Y22 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms