Protein–RNA interactions for Protein: Q86WS4

C12orf40, Uncharacterized protein C12orf40, humanhuman

Predictions only

Length 652 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40Q86WS4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf40Q86WS4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf40Q86WS4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf40Q86WS4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf40Q86WS4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf40Q86WS4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
C12orf40Q86WS4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf40Q86WS4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf40Q86WS4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.72■□□□□ 0.27
C12orf40Q86WS4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf40Q86WS4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf40Q86WS4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.72■□□□□ 0.27
C12orf40Q86WS4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
C12orf40Q86WS4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C12orf40Q86WS4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
C12orf40Q86WS4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
C12orf40Q86WS4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
C12orf40Q86WS4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
C12orf40Q86WS4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
C12orf40Q86WS4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
C12orf40Q86WS4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
C12orf40Q86WS4 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.71■□□□□ 0.27
C12orf40Q86WS4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.71■□□□□ 0.27
C12orf40Q86WS4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
C12orf40Q86WS4 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.71■□□□□ 0.27
C12orf40Q86WS4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.71■□□□□ 0.27
C12orf40Q86WS4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.71■□□□□ 0.27
C12orf40Q86WS4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
C12orf40Q86WS4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.71■□□□□ 0.27
C12orf40Q86WS4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.71■□□□□ 0.27
C12orf40Q86WS4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.71■□□□□ 0.27
C12orf40Q86WS4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.71■□□□□ 0.27
C12orf40Q86WS4 AL512361.1-201ENST00000554200 418 ntBASIC16.71■□□□□ 0.27
C12orf40Q86WS4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.71■□□□□ 0.27
C12orf40Q86WS4 AC004790.1-201ENST00000612686 536 ntBASIC16.71■□□□□ 0.27
C12orf40Q86WS4 AC105020.1-201ENST00000435356 2205 ntBASIC16.71■□□□□ 0.27
C12orf40Q86WS4 RNF216P1-203ENST00000404404 2427 ntBASIC16.71■□□□□ 0.27
C12orf40Q86WS4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
C12orf40Q86WS4 AC006538.1-201ENST00000567905 1585 ntBASIC16.71■□□□□ 0.27
C12orf40Q86WS4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
C12orf40Q86WS4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
C12orf40Q86WS4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
C12orf40Q86WS4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 AC063926.2-201ENST00000623766 1308 ntBASIC16.7■□□□□ 0.26
C12orf40Q86WS4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 GAPDHP21-201ENST00000450301 1010 ntBASIC16.7■□□□□ 0.26
C12orf40Q86WS4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
C12orf40Q86WS4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C12orf40Q86WS4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C12orf40Q86WS4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C12orf40Q86WS4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
C12orf40Q86WS4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C12orf40Q86WS4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
C12orf40Q86WS4 AC012313.1-201ENST00000593393 3059 ntBASIC16.69■□□□□ 0.26
C12orf40Q86WS4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C12orf40Q86WS4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.69■□□□□ 0.26
C12orf40Q86WS4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
C12orf40Q86WS4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
C12orf40Q86WS4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.69■□□□□ 0.26
C12orf40Q86WS4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C12orf40Q86WS4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.69■□□□□ 0.26
C12orf40Q86WS4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.69■□□□□ 0.26
C12orf40Q86WS4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms