Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTF1AQ7RTS3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.86■□□□□ 0.93
PTF1AQ7RTS3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.86■□□□□ 0.93
PTF1AQ7RTS3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PTF1AQ7RTS3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC20.86■□□□□ 0.93
PTF1AQ7RTS3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTF1AQ7RTS3 AL031731.1-201ENST00000642131 2094 ntBASIC20.85■□□□□ 0.93
PTF1AQ7RTS3 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC20.85■□□□□ 0.93
PTF1AQ7RTS3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTF1AQ7RTS3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTF1AQ7RTS3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTF1AQ7RTS3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PTF1AQ7RTS3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTF1AQ7RTS3 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PTF1AQ7RTS3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTF1AQ7RTS3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTF1AQ7RTS3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC20.85■□□□□ 0.93
PTF1AQ7RTS3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC20.85■□□□□ 0.93
PTF1AQ7RTS3 MIR6727-201ENST00000620702 65 ntBASIC20.85■□□□□ 0.93
PTF1AQ7RTS3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PTF1AQ7RTS3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC20.85■□□□□ 0.93
PTF1AQ7RTS3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTF1AQ7RTS3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTF1AQ7RTS3 AL607033.1-201ENST00000623900 1599 ntBASIC20.85■□□□□ 0.93
PTF1AQ7RTS3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 AC105129.2-201ENST00000559536 390 ntBASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 GPAA1P2-202ENST00000606848 1787 ntBASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 AL645728.1-201ENST00000366221 2101 ntBASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTF1AQ7RTS3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.83■□□□□ 0.93
PTF1AQ7RTS3 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTF1AQ7RTS3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PTF1AQ7RTS3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTF1AQ7RTS3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTF1AQ7RTS3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTF1AQ7RTS3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.83■□□□□ 0.93
PTF1AQ7RTS3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTF1AQ7RTS3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PTF1AQ7RTS3 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PTF1AQ7RTS3 KRT18P64-201ENST00000434946 1219 ntBASIC20.83■□□□□ 0.93
PTF1AQ7RTS3 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC20.83■□□□□ 0.93
PTF1AQ7RTS3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC20.83■□□□□ 0.93
PTF1AQ7RTS3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC20.83■□□□□ 0.93
PTF1AQ7RTS3 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC20.83■□□□□ 0.93
PTF1AQ7RTS3 KRT90P-201ENST00000549264 1064 ntBASIC20.83■□□□□ 0.93
PTF1AQ7RTS3 DUX4L45-201ENST00000566406 1057 ntBASIC20.83■□□□□ 0.93
PTF1AQ7RTS3 GNRHR2-203ENST00000581100 1187 ntBASIC20.83■□□□□ 0.93
PTF1AQ7RTS3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTF1AQ7RTS3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC20.83■□□□□ 0.93
PTF1AQ7RTS3 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC20.83■□□□□ 0.93
PTF1AQ7RTS3 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PTF1AQ7RTS3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PTF1AQ7RTS3 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC20.83■□□□□ 0.92
PTF1AQ7RTS3 AL138688.1-201ENST00000624851 1594 ntBASIC20.83■□□□□ 0.92
PTF1AQ7RTS3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
PTF1AQ7RTS3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTF1AQ7RTS3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
PTF1AQ7RTS3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTF1AQ7RTS3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PTF1AQ7RTS3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTF1AQ7RTS3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTF1AQ7RTS3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTF1AQ7RTS3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.82■□□□□ 0.92
PTF1AQ7RTS3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTF1AQ7RTS3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTF1AQ7RTS3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTF1AQ7RTS3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTF1AQ7RTS3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms