Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 FICD-205ENST00000552758 603 ntTSL 2 BASIC15□□□□□ -0.01
SHFQ7M4L6 AC104640.1-201ENST00000562617 2109 ntBASIC15□□□□□ -0.01
SHFQ7M4L6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15□□□□□ -0.01
SHFQ7M4L6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15□□□□□ -0.01
SHFQ7M4L6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15□□□□□ -0.01
SHFQ7M4L6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHFQ7M4L6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHFQ7M4L6 AC013467.2-201ENST00000605472 835 ntBASIC15□□□□□ -0.01
SHFQ7M4L6 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHFQ7M4L6 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHFQ7M4L6 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHFQ7M4L6 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
SHFQ7M4L6 SNX33P1-201ENST00000592116 1762 ntBASIC15□□□□□ -0.01
SHFQ7M4L6 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SHFQ7M4L6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SHFQ7M4L6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15□□□□□ -0.01
SHFQ7M4L6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15□□□□□ -0.01
SHFQ7M4L6 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
SHFQ7M4L6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
SHFQ7M4L6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
SHFQ7M4L6 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15□□□□□ -0.01
SHFQ7M4L6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15□□□□□ -0.01
SHFQ7M4L6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
SHFQ7M4L6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHFQ7M4L6 AP005117.1-201ENST00000584346 1413 ntBASIC15□□□□□ -0.01
SHFQ7M4L6 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15□□□□□ -0.01
SHFQ7M4L6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SHFQ7M4L6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15□□□□□ -0.01
SHFQ7M4L6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SHFQ7M4L6 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHFQ7M4L6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHFQ7M4L6 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHFQ7M4L6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
SHFQ7M4L6 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHFQ7M4L6 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.99□□□□□ -0.01
SHFQ7M4L6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.99□□□□□ -0.01
SHFQ7M4L6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHFQ7M4L6 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHFQ7M4L6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.99□□□□□ -0.01
SHFQ7M4L6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.99□□□□□ -0.01
SHFQ7M4L6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHFQ7M4L6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHFQ7M4L6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHFQ7M4L6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.99□□□□□ -0.01
SHFQ7M4L6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
SHFQ7M4L6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.99□□□□□ -0.01
SHFQ7M4L6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHFQ7M4L6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
SHFQ7M4L6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.99□□□□□ -0.01
SHFQ7M4L6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.99□□□□□ -0.01
SHFQ7M4L6 AL353135.1-201ENST00000606729 504 ntBASIC14.99□□□□□ -0.01
SHFQ7M4L6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.99□□□□□ -0.01
SHFQ7M4L6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHFQ7M4L6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.99□□□□□ -0.01
SHFQ7M4L6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHFQ7M4L6 AL136379.1-201ENST00000623471 2642 ntBASIC14.99□□□□□ -0.01
SHFQ7M4L6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.99□□□□□ -0.01
SHFQ7M4L6 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SHFQ7M4L6 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.99□□□□□ -0.01
SHFQ7M4L6 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHFQ7M4L6 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHFQ7M4L6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHFQ7M4L6 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHFQ7M4L6 REXO1L8P-201ENST00000604378 1897 ntBASIC14.99□□□□□ -0.01
SHFQ7M4L6 NCF1C-201ENST00000438382 1427 ntBASIC14.99□□□□□ -0.01
SHFQ7M4L6 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHFQ7M4L6 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHFQ7M4L6 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SHFQ7M4L6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.99□□□□□ -0.01
SHFQ7M4L6 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SHFQ7M4L6 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHFQ7M4L6 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHFQ7M4L6 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.98□□□□□ -0.01
SHFQ7M4L6 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHFQ7M4L6 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.98□□□□□ -0.01
SHFQ7M4L6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.98□□□□□ -0.01
SHFQ7M4L6 AL590787.1-201ENST00000568856 1315 ntBASIC14.98□□□□□ -0.01
SHFQ7M4L6 AL512652.2-201ENST00000625156 1716 ntBASIC14.98□□□□□ -0.01
SHFQ7M4L6 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHFQ7M4L6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.98□□□□□ -0.01
SHFQ7M4L6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
SHFQ7M4L6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.98□□□□□ -0.01
SHFQ7M4L6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.98□□□□□ -0.01
SHFQ7M4L6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.98□□□□□ -0.01
SHFQ7M4L6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHFQ7M4L6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.98□□□□□ -0.01
SHFQ7M4L6 TERC-201ENST00000602385 541 ntBASIC14.98□□□□□ -0.01
SHFQ7M4L6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.98□□□□□ -0.01
SHFQ7M4L6 AL139011.1-202ENST00000642063 584 ntBASIC14.98□□□□□ -0.01
SHFQ7M4L6 AC073347.1-201ENST00000421633 2643 ntBASIC14.98□□□□□ -0.01
SHFQ7M4L6 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
SHFQ7M4L6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SHFQ7M4L6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHFQ7M4L6 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SHFQ7M4L6 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHFQ7M4L6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHFQ7M4L6 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.98□□□□□ -0.01
SHFQ7M4L6 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHFQ7M4L6 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SHFQ7M4L6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms