Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 DNAJB3-201ENST00000446806 729 ntBASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.34■□□□□ 0.05
CHMP1BQ7LBR1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CHMP1BQ7LBR1 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.33■□□□□ 0.05
CHMP1BQ7LBR1 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CHMP1BQ7LBR1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CHMP1BQ7LBR1 AL136379.1-201ENST00000623471 2642 ntBASIC15.33■□□□□ 0.05
CHMP1BQ7LBR1 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CHMP1BQ7LBR1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 AC093525.9-201ENST00000624961 1746 ntBASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 AC129492.6-201ENST00000611383 1305 ntBASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP1BQ7LBR1 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 AC023274.1-201ENST00000418278 595 ntBASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 HCG4B-203ENST00000450128 991 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms