Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NHLRC1Q6VVB1 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NHLRC1Q6VVB1 AC104109.2-201ENST00000602919 1418 ntBASIC14.89□□□□□ -0.03
NHLRC1Q6VVB1 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.89□□□□□ -0.03
NHLRC1Q6VVB1 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
NHLRC1Q6VVB1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NHLRC1Q6VVB1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.89□□□□□ -0.03
NHLRC1Q6VVB1 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NHLRC1Q6VVB1 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.89□□□□□ -0.03
NHLRC1Q6VVB1 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NHLRC1Q6VVB1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NHLRC1Q6VVB1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 SLC25A1P1-201ENST00000528351 927 ntBASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 AC010507.1-201ENST00000633895 436 ntBASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NHLRC1Q6VVB1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 AL590627.1-203ENST00000421194 1026 ntBASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 AP001350.2-201ENST00000625104 1094 ntBASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 AL645728.2-201ENST00000641974 660 ntBASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.87□□□□□ -0.03
NHLRC1Q6VVB1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms