Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.6■□□□□ 0.57
SHC4Q6S5L8 AC092919.2-201ENST00000623631 1645 ntBASIC18.6■□□□□ 0.57
SHC4Q6S5L8 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 AC093909.1-201ENST00000504731 1122 ntBASIC18.59■□□□□ 0.57
SHC4Q6S5L8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 Z83851.2-201ENST00000609564 659 ntBASIC18.59■□□□□ 0.57
SHC4Q6S5L8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHC4Q6S5L8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SHC4Q6S5L8 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
SHC4Q6S5L8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SHC4Q6S5L8 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SHC4Q6S5L8 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.58■□□□□ 0.57
SHC4Q6S5L8 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SHC4Q6S5L8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.58■□□□□ 0.56
SHC4Q6S5L8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms