Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 AC097376.2-205ENST00000610159 5334 ntBASIC13.2□□□□□ -0.3
FAM78BQ5VT40 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 LINC00895-201ENST00000629028 1637 ntBASIC13.19□□□□□ -0.3
FAM78BQ5VT40 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FAM78BQ5VT40 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 AC132938.5-201ENST00000624980 1813 ntBASIC13.18□□□□□ -0.3
FAM78BQ5VT40 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 AL031133.1-201ENST00000406807 723 ntBASIC13.18□□□□□ -0.3
FAM78BQ5VT40 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 AC087388.1-201ENST00000571370 1112 ntBASIC13.18□□□□□ -0.3
FAM78BQ5VT40 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 AC124864.1-201ENST00000623408 392 ntBASIC13.18□□□□□ -0.3
FAM78BQ5VT40 AL590326.2-201ENST00000625139 305 ntBASIC13.18□□□□□ -0.3
FAM78BQ5VT40 AL121956.5-201ENST00000625261 221 ntBASIC13.18□□□□□ -0.3
FAM78BQ5VT40 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms