Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 DRAXINP1-201ENST00000437611 948 ntBASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
LINC00242Q5T6M2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 AC069224.1-201ENST00000566372 1715 ntBASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 POM121L3P-201ENST00000419331 1163 ntBASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 IGHV3-47-201ENST00000425060 335 ntBASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 PRYP5-201ENST00000451909 266 ntBASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms