Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC008738.7-201ENST00000609744 511 ntBASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 LTB4R2-202ENST00000528054 3092 ntBASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 OR6D1P-202ENST00000641007 5290 ntBASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 RNF216P1-203ENST00000404404 2427 ntBASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 AL080243.2-201ENST00000418783 582 ntBASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 SPTLC1P1-201ENST00000447199 261 ntBASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 AC012645.4-201ENST00000610691 1061 ntBASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 AC087499.5-201ENST00000452760 1342 ntBASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 AC006538.1-201ENST00000567905 1585 ntBASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNFT1Q5M7Z0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 AC005034.1-201ENST00000426657 489 ntBASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 AC005225.4-201ENST00000557330 545 ntBASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 AC061975.2-201ENST00000581722 295 ntBASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 AC009118.2-201ENST00000613275 655 ntBASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.79□□□□□ -0.04
RNFT1Q5M7Z0 AL035252.4-201ENST00000624174 288 ntBASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms