Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.01□□□□□ -0.17
SSBP1Q04837 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP1Q04837 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
SSBP1Q04837 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP1Q04837 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
SSBP1Q04837 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP1Q04837 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP1Q04837 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP1Q04837 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP1Q04837 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SSBP1Q04837 AC007292.2-201ENST00000593524 1812 ntBASIC14.01□□□□□ -0.17
SSBP1Q04837 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP1Q04837 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.01□□□□□ -0.17
SSBP1Q04837 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SSBP1Q04837 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
SSBP1Q04837 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SSBP1Q04837 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SSBP1Q04837 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP1Q04837 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SSBP1Q04837 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14□□□□□ -0.17
SSBP1Q04837 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14□□□□□ -0.17
SSBP1Q04837 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP1Q04837 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP1Q04837 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14□□□□□ -0.17
SSBP1Q04837 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14□□□□□ -0.17
SSBP1Q04837 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP1Q04837 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP1Q04837 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP1Q04837 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP1Q04837 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP1Q04837 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14□□□□□ -0.17
SSBP1Q04837 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP1Q04837 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
SSBP1Q04837 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP1Q04837 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14□□□□□ -0.17
SSBP1Q04837 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14□□□□□ -0.17
SSBP1Q04837 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP1Q04837 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP1Q04837 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14□□□□□ -0.17
SSBP1Q04837 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP1Q04837 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP1Q04837 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14□□□□□ -0.17
SSBP1Q04837 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14□□□□□ -0.17
SSBP1Q04837 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP1Q04837 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14□□□□□ -0.17
SSBP1Q04837 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14□□□□□ -0.17
SSBP1Q04837 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14□□□□□ -0.17
SSBP1Q04837 BX664615.1-201ENST00000443558 458 ntBASIC14□□□□□ -0.17
SSBP1Q04837 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14□□□□□ -0.17
SSBP1Q04837 AC112907.2-201ENST00000448639 330 ntBASIC14□□□□□ -0.17
SSBP1Q04837 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14□□□□□ -0.17
SSBP1Q04837 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14□□□□□ -0.17
SSBP1Q04837 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14□□□□□ -0.17
SSBP1Q04837 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14□□□□□ -0.17
SSBP1Q04837 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14□□□□□ -0.17
SSBP1Q04837 AC145285.6-201ENST00000604632 637 ntBASIC14□□□□□ -0.17
SSBP1Q04837 IGHV3-41-201ENST00000613121 348 ntBASIC14□□□□□ -0.17
SSBP1Q04837 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
SSBP1Q04837 HYMAI.1-201ENST00000620949 238 ntBASIC14□□□□□ -0.17
SSBP1Q04837 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14□□□□□ -0.17
SSBP1Q04837 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP1Q04837 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14□□□□□ -0.17
SSBP1Q04837 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP1Q04837 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SSBP1Q04837 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14□□□□□ -0.17
SSBP1Q04837 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP1Q04837 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SSBP1Q04837 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14□□□□□ -0.17
SSBP1Q04837 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14□□□□□ -0.17
SSBP1Q04837 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14□□□□□ -0.17
SSBP1Q04837 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP1Q04837 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP1Q04837 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14□□□□□ -0.17
SSBP1Q04837 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14□□□□□ -0.17
SSBP1Q04837 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14□□□□□ -0.17
SSBP1Q04837 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14□□□□□ -0.17
SSBP1Q04837 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP1Q04837 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
SSBP1Q04837 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP1Q04837 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP1Q04837 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP1Q04837 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.99□□□□□ -0.17
SSBP1Q04837 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.99□□□□□ -0.17
SSBP1Q04837 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP1Q04837 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SSBP1Q04837 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP1Q04837 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.99□□□□□ -0.17
SSBP1Q04837 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SSBP1Q04837 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.99□□□□□ -0.17
SSBP1Q04837 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.99□□□□□ -0.17
SSBP1Q04837 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SSBP1Q04837 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SSBP1Q04837 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.99□□□□□ -0.17
SSBP1Q04837 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SSBP1Q04837 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SSBP1Q04837 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP1Q04837 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP1Q04837 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP1Q04837 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.99□□□□□ -0.17
SSBP1Q04837 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms