Protein–RNA interactions for Protein: P84550

SKOR1, SKI family transcriptional corepressor 1, humanhuman

Predictions only

Length 965 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKOR1P84550 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SKOR1P84550 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.4■□□□□ 0.38
SKOR1P84550 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SKOR1P84550 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SKOR1P84550 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SKOR1P84550 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.4■□□□□ 0.38
SKOR1P84550 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SKOR1P84550 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.4■□□□□ 0.38
SKOR1P84550 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SKOR1P84550 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SKOR1P84550 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SKOR1P84550 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.4■□□□□ 0.38
SKOR1P84550 AC106730.1-201ENST00000566722 1090 ntBASIC17.4■□□□□ 0.38
SKOR1P84550 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.4■□□□□ 0.38
SKOR1P84550 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.4■□□□□ 0.38
SKOR1P84550 AC148477.8-201ENST00000624298 468 ntBASIC17.4■□□□□ 0.38
SKOR1P84550 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SKOR1P84550 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SKOR1P84550 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SKOR1P84550 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.4■□□□□ 0.38
SKOR1P84550 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.4■□□□□ 0.38
SKOR1P84550 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SKOR1P84550 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SKOR1P84550 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SKOR1P84550 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SKOR1P84550 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SKOR1P84550 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.39■□□□□ 0.38
SKOR1P84550 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
SKOR1P84550 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.39■□□□□ 0.38
SKOR1P84550 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SKOR1P84550 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SKOR1P84550 AL603832.2-201ENST00000566195 2125 ntBASIC17.39■□□□□ 0.38
SKOR1P84550 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SKOR1P84550 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.39■□□□□ 0.37
SKOR1P84550 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SKOR1P84550 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SKOR1P84550 TNRC18P2-201ENST00000417666 2714 ntBASIC17.39■□□□□ 0.37
SKOR1P84550 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SKOR1P84550 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SKOR1P84550 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SKOR1P84550 FRMD8P1-201ENST00000440433 1524 ntBASIC17.39■□□□□ 0.37
SKOR1P84550 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.39■□□□□ 0.37
SKOR1P84550 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SKOR1P84550 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.39■□□□□ 0.37
SKOR1P84550 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.39■□□□□ 0.37
SKOR1P84550 LAGE3P1-201ENST00000425356 484 ntBASIC17.39■□□□□ 0.37
SKOR1P84550 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.39■□□□□ 0.37
SKOR1P84550 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.39■□□□□ 0.37
SKOR1P84550 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.39■□□□□ 0.37
SKOR1P84550 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.39■□□□□ 0.37
SKOR1P84550 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.39■□□□□ 0.37
SKOR1P84550 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SKOR1P84550 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SKOR1P84550 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
SKOR1P84550 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SKOR1P84550 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SKOR1P84550 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SKOR1P84550 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SKOR1P84550 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SKOR1P84550 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SKOR1P84550 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.38■□□□□ 0.37
SKOR1P84550 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SKOR1P84550 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SKOR1P84550 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.38■□□□□ 0.37
SKOR1P84550 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SKOR1P84550 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.38■□□□□ 0.37
SKOR1P84550 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SKOR1P84550 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.38■□□□□ 0.37
SKOR1P84550 AC092183.1-201ENST00000469884 875 ntBASIC17.38■□□□□ 0.37
SKOR1P84550 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.38■□□□□ 0.37
SKOR1P84550 OR7E14P-202ENST00000530490 1290 ntBASIC17.38■□□□□ 0.37
SKOR1P84550 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.38■□□□□ 0.37
SKOR1P84550 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.38■□□□□ 0.37
SKOR1P84550 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.38■□□□□ 0.37
SKOR1P84550 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.38■□□□□ 0.37
SKOR1P84550 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.38■□□□□ 0.37
SKOR1P84550 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.38■□□□□ 0.37
SKOR1P84550 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.38■□□□□ 0.37
SKOR1P84550 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SKOR1P84550 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SKOR1P84550 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SKOR1P84550 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SKOR1P84550 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SKOR1P84550 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SKOR1P84550 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.38■□□□□ 0.37
SKOR1P84550 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SKOR1P84550 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SKOR1P84550 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SKOR1P84550 AL645728.1-201ENST00000366221 2101 ntBASIC17.38■□□□□ 0.37
SKOR1P84550 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.38■□□□□ 0.37
SKOR1P84550 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SKOR1P84550 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SKOR1P84550 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SKOR1P84550 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
SKOR1P84550 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SKOR1P84550 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SKOR1P84550 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
SKOR1P84550 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SKOR1P84550 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.37■□□□□ 0.37
SKOR1P84550 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms