Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.43■□□□□ 0.7
CACNB3P54284 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
CACNB3P54284 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CACNB3P54284 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CACNB3P54284 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CACNB3P54284 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC19.43■□□□□ 0.7
CACNB3P54284 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNB3P54284 AC005915.1-201ENST00000624912 2018 ntBASIC19.42■□□□□ 0.7
CACNB3P54284 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNB3P54284 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CACNB3P54284 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CACNB3P54284 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNB3P54284 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CACNB3P54284 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CACNB3P54284 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
CACNB3P54284 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.42■□□□□ 0.7
CACNB3P54284 ATP5G2P4-201ENST00000442175 420 ntBASIC19.42■□□□□ 0.7
CACNB3P54284 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC19.42■□□□□ 0.7
CACNB3P54284 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC19.42■□□□□ 0.7
CACNB3P54284 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.42■□□□□ 0.7
CACNB3P54284 AL359881.2-201ENST00000602973 570 ntBASIC19.42■□□□□ 0.7
CACNB3P54284 AC004461.2-201ENST00000629517 803 ntBASIC19.42■□□□□ 0.7
CACNB3P54284 AL109936.8-201ENST00000641772 604 ntBASIC19.42■□□□□ 0.7
CACNB3P54284 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CACNB3P54284 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNB3P54284 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNB3P54284 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNB3P54284 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNB3P54284 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNB3P54284 KRT8P12-202ENST00000472924 1397 ntBASIC19.42■□□□□ 0.7
CACNB3P54284 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNB3P54284 AL645608.8-201ENST00000606034 2086 ntBASIC19.42■□□□□ 0.7
CACNB3P54284 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNB3P54284 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNB3P54284 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.42■□□□□ 0.7
CACNB3P54284 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CACNB3P54284 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNB3P54284 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNB3P54284 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.41■□□□□ 0.7
CACNB3P54284 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNB3P54284 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNB3P54284 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNB3P54284 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CACNB3P54284 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CACNB3P54284 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNB3P54284 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNB3P54284 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CACNB3P54284 AC114501.2-201ENST00000439631 535 ntBASIC19.41■□□□□ 0.7
CACNB3P54284 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNB3P54284 GIMAP3P-201ENST00000495150 836 ntBASIC19.41■□□□□ 0.7
CACNB3P54284 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CACNB3P54284 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.41■□□□□ 0.7
CACNB3P54284 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.41■□□□□ 0.7
CACNB3P54284 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNB3P54284 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.41■□□□□ 0.7
CACNB3P54284 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CACNB3P54284 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNB3P54284 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
CACNB3P54284 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNB3P54284 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
CACNB3P54284 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNB3P54284 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNB3P54284 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNB3P54284 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNB3P54284 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.41■□□□□ 0.7
CACNB3P54284 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNB3P54284 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNB3P54284 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNB3P54284 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNB3P54284 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CACNB3P54284 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNB3P54284 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNB3P54284 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNB3P54284 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNB3P54284 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CACNB3P54284 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNB3P54284 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNB3P54284 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNB3P54284 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.4■□□□□ 0.7
CACNB3P54284 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CACNB3P54284 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.4■□□□□ 0.7
CACNB3P54284 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.4■□□□□ 0.7
CACNB3P54284 RN7SL752P-201ENST00000463779 287 ntBASIC19.4■□□□□ 0.7
CACNB3P54284 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CACNB3P54284 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.4■□□□□ 0.7
CACNB3P54284 AP002490.2-201ENST00000524791 560 ntBASIC19.4■□□□□ 0.7
CACNB3P54284 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CACNB3P54284 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CACNB3P54284 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CACNB3P54284 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC19.4■□□□□ 0.7
CACNB3P54284 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.4■□□□□ 0.7
CACNB3P54284 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC19.4■□□□□ 0.7
CACNB3P54284 SRD5A3P1-201ENST00000603021 949 ntBASIC19.4■□□□□ 0.7
CACNB3P54284 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.4■□□□□ 0.7
CACNB3P54284 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.4■□□□□ 0.7
CACNB3P54284 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.4■□□□□ 0.7
CACNB3P54284 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNB3P54284 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNB3P54284 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNB3P54284 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms