Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 KRT17P8-201ENST00000540749 863 ntBASIC23.22■■□□□ 1.31
CLTCL1P53675 RARRES2P5-201ENST00000564013 466 ntBASIC23.22■■□□□ 1.31
CLTCL1P53675 AC010319.3-201ENST00000597028 470 ntBASIC23.22■■□□□ 1.31
CLTCL1P53675 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC23.22■■□□□ 1.31
CLTCL1P53675 SERF2-217ENST00000630046 862 ntTSL 5 BASIC23.22■■□□□ 1.31
CLTCL1P53675 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC23.22■■□□□ 1.31
CLTCL1P53675 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLTCL1P53675 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLTCL1P53675 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLTCL1P53675 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC23.22■■□□□ 1.31
CLTCL1P53675 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLTCL1P53675 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLTCL1P53675 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLTCL1P53675 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLTCL1P53675 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC23.22■■□□□ 1.31
CLTCL1P53675 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLTCL1P53675 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CLTCL1P53675 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLTCL1P53675 AC009053.2-201ENST00000563701 2365 ntBASIC23.22■■□□□ 1.31
CLTCL1P53675 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLTCL1P53675 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLTCL1P53675 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLTCL1P53675 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC23.22■■□□□ 1.31
CLTCL1P53675 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC23.22■■□□□ 1.31
CLTCL1P53675 TARDBPP1-201ENST00000442013 1203 ntBASIC23.22■■□□□ 1.31
CLTCL1P53675 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC23.22■■□□□ 1.31
CLTCL1P53675 AC007389.4-201ENST00000454674 793 ntBASIC23.22■■□□□ 1.31
CLTCL1P53675 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC23.22■■□□□ 1.31
CLTCL1P53675 FADS2-205ENST00000517839 469 ntTSL 3 BASIC23.22■■□□□ 1.31
CLTCL1P53675 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC23.22■■□□□ 1.31
CLTCL1P53675 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC23.22■■□□□ 1.31
CLTCL1P53675 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CLTCL1P53675 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLTCL1P53675 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC23.21■■□□□ 1.31
CLTCL1P53675 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLTCL1P53675 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
CLTCL1P53675 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CLTCL1P53675 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
CLTCL1P53675 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLTCL1P53675 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLTCL1P53675 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLTCL1P53675 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLTCL1P53675 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CLTCL1P53675 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLTCL1P53675 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
CLTCL1P53675 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
CLTCL1P53675 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC23.21■■□□□ 1.31
CLTCL1P53675 CDC14C-201ENST00000428251 1719 ntBASIC23.21■■□□□ 1.31
CLTCL1P53675 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC23.21■■□□□ 1.31
CLTCL1P53675 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
CLTCL1P53675 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC23.21■■□□□ 1.31
CLTCL1P53675 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CLTCL1P53675 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC23.21■■□□□ 1.31
CLTCL1P53675 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC23.21■■□□□ 1.31
CLTCL1P53675 TMEM261P1-201ENST00000604899 340 ntBASIC23.21■■□□□ 1.31
CLTCL1P53675 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
CLTCL1P53675 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CLTCL1P53675 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLTCL1P53675 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC23.21■■□□□ 1.31
CLTCL1P53675 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
CLTCL1P53675 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
CLTCL1P53675 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
CLTCL1P53675 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
CLTCL1P53675 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.31
CLTCL1P53675 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
CLTCL1P53675 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.31
CLTCL1P53675 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CLTCL1P53675 AL691432.1-201ENST00000596308 1422 ntBASIC23.2■■□□□ 1.3
CLTCL1P53675 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLTCL1P53675 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CLTCL1P53675 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC23.2■■□□□ 1.3
CLTCL1P53675 MEP1AP4-201ENST00000423244 1087 ntBASIC23.2■■□□□ 1.3
CLTCL1P53675 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC23.2■■□□□ 1.3
CLTCL1P53675 KRT18P64-201ENST00000434946 1219 ntBASIC23.2■■□□□ 1.3
CLTCL1P53675 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC23.2■■□□□ 1.3
CLTCL1P53675 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC23.2■■□□□ 1.3
CLTCL1P53675 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC23.2■■□□□ 1.3
CLTCL1P53675 AC011495.1-201ENST00000498085 584 ntBASIC23.2■■□□□ 1.3
CLTCL1P53675 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC23.2■■□□□ 1.3
CLTCL1P53675 HNRNPUP1-201ENST00000554987 333 ntBASIC23.2■■□□□ 1.3
CLTCL1P53675 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC23.2■■□□□ 1.3
CLTCL1P53675 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC23.2■■□□□ 1.3
CLTCL1P53675 MIR6805-201ENST00000615055 62 ntBASIC23.2■■□□□ 1.3
CLTCL1P53675 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLTCL1P53675 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC23.2■■□□□ 1.3
CLTCL1P53675 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLTCL1P53675 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC23.2■■□□□ 1.3
CLTCL1P53675 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC23.2■■□□□ 1.3
CLTCL1P53675 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLTCL1P53675 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CLTCL1P53675 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
CLTCL1P53675 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC23.19■■□□□ 1.3
CLTCL1P53675 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC23.19■■□□□ 1.3
CLTCL1P53675 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC23.19■■□□□ 1.3
CLTCL1P53675 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC23.19■■□□□ 1.3
CLTCL1P53675 PAM16-204ENST00000571941 674 ntTSL 3 BASIC23.19■■□□□ 1.3
CLTCL1P53675 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC23.19■■□□□ 1.3
CLTCL1P53675 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC23.19■■□□□ 1.3
CLTCL1P53675 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC23.19■■□□□ 1.3
CLTCL1P53675 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms