Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
GPC3P51654 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
GPC3P51654 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
GPC3P51654 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.2■□□□□ 0.5
GPC3P51654 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
GPC3P51654 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GPC3P51654 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GPC3P51654 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
GPC3P51654 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GPC3P51654 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.2■□□□□ 0.5
GPC3P51654 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GPC3P51654 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.2■□□□□ 0.5
GPC3P51654 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
GPC3P51654 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GPC3P51654 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.2■□□□□ 0.5
GPC3P51654 RARRES2P9-201ENST00000565168 469 ntBASIC18.2■□□□□ 0.5
GPC3P51654 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.2■□□□□ 0.5
GPC3P51654 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.2■□□□□ 0.5
GPC3P51654 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GPC3P51654 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
GPC3P51654 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.2■□□□□ 0.5
GPC3P51654 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GPC3P51654 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.2■□□□□ 0.5
GPC3P51654 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GPC3P51654 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.2■□□□□ 0.5
GPC3P51654 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GPC3P51654 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.2■□□□□ 0.5
GPC3P51654 AL512652.2-201ENST00000625156 1716 ntBASIC18.2■□□□□ 0.5
GPC3P51654 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.2■□□□□ 0.5
GPC3P51654 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.2■□□□□ 0.5
GPC3P51654 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
GPC3P51654 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GPC3P51654 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.19■□□□□ 0.5
GPC3P51654 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
GPC3P51654 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GPC3P51654 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
GPC3P51654 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GPC3P51654 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GPC3P51654 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
GPC3P51654 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GPC3P51654 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GPC3P51654 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
GPC3P51654 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.19■□□□□ 0.5
GPC3P51654 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GPC3P51654 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GPC3P51654 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.19■□□□□ 0.5
GPC3P51654 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GPC3P51654 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GPC3P51654 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.19■□□□□ 0.5
GPC3P51654 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.19■□□□□ 0.5
GPC3P51654 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.19■□□□□ 0.5
GPC3P51654 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.19■□□□□ 0.5
GPC3P51654 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.19■□□□□ 0.5
GPC3P51654 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GPC3P51654 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.19■□□□□ 0.5
GPC3P51654 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.19■□□□□ 0.5
GPC3P51654 AC093214.1-201ENST00000511688 1107 ntBASIC18.19■□□□□ 0.5
GPC3P51654 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.19■□□□□ 0.5
GPC3P51654 MIR4453-201ENST00000584019 89 ntBASIC18.19■□□□□ 0.5
GPC3P51654 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.19■□□□□ 0.5
GPC3P51654 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
GPC3P51654 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GPC3P51654 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GPC3P51654 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.19■□□□□ 0.5
GPC3P51654 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GPC3P51654 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
GPC3P51654 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GPC3P51654 AC099398.1-201ENST00000567919 2776 ntBASIC18.19■□□□□ 0.5
GPC3P51654 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.18■□□□□ 0.5
GPC3P51654 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GPC3P51654 FO538757.1-201ENST00000623083 1397 ntBASIC18.18■□□□□ 0.5
GPC3P51654 HLA-A-202ENST00000376806 1854 ntBASIC18.18■□□□□ 0.5
GPC3P51654 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.18■□□□□ 0.5
GPC3P51654 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC3P51654 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
GPC3P51654 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.18■□□□□ 0.5
GPC3P51654 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GPC3P51654 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.18■□□□□ 0.5
GPC3P51654 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.18■□□□□ 0.5
GPC3P51654 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GPC3P51654 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC3P51654 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC3P51654 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.18■□□□□ 0.5
GPC3P51654 TREML5P-201ENST00000421694 576 ntBASIC18.18■□□□□ 0.5
GPC3P51654 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.18■□□□□ 0.5
GPC3P51654 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.18■□□□□ 0.5
GPC3P51654 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC3P51654 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.18■□□□□ 0.5
GPC3P51654 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.18■□□□□ 0.5
GPC3P51654 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.18■□□□□ 0.5
GPC3P51654 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.18■□□□□ 0.5
GPC3P51654 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
GPC3P51654 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.18■□□□□ 0.5
GPC3P51654 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GPC3P51654 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
GPC3P51654 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC3P51654 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC3P51654 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GPC3P51654 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.18■□□□□ 0.5
GPC3P51654 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms