Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF144AP50876 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF144AP50876 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF144AP50876 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF144AP50876 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF144AP50876 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RNF144AP50876 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF144AP50876 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF144AP50876 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF144AP50876 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF144AP50876 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF144AP50876 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF144AP50876 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF144AP50876 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF144AP50876 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF144AP50876 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF144AP50876 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF144AP50876 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.41■□□□□ 0.06
RNF144AP50876 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
RNF144AP50876 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF144AP50876 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.41■□□□□ 0.06
RNF144AP50876 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF144AP50876 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF144AP50876 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.41■□□□□ 0.06
RNF144AP50876 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.41■□□□□ 0.06
RNF144AP50876 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF144AP50876 AC010654.1-201ENST00000615722 808 ntBASIC15.41■□□□□ 0.06
RNF144AP50876 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF144AP50876 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF144AP50876 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF144AP50876 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF144AP50876 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RNF144AP50876 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF144AP50876 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RNF144AP50876 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF144AP50876 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF144AP50876 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF144AP50876 AL513523.2-202ENST00000427283 2040 ntBASIC15.41■□□□□ 0.06
RNF144AP50876 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF144AP50876 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
RNF144AP50876 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF144AP50876 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RNF144AP50876 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF144AP50876 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF144AP50876 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF144AP50876 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RNF144AP50876 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RNF144AP50876 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF144AP50876 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF144AP50876 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF144AP50876 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF144AP50876 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RNF144AP50876 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
RNF144AP50876 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF144AP50876 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF144AP50876 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF144AP50876 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF144AP50876 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF144AP50876 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
RNF144AP50876 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF144AP50876 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF144AP50876 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF144AP50876 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.4■□□□□ 0.06
RNF144AP50876 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF144AP50876 VN2R19P-201ENST00000442399 1052 ntBASIC15.4■□□□□ 0.06
RNF144AP50876 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF144AP50876 RPL13AP23-201ENST00000480739 586 ntBASIC15.4■□□□□ 0.06
RNF144AP50876 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF144AP50876 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF144AP50876 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF144AP50876 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.4■□□□□ 0.06
RNF144AP50876 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.4■□□□□ 0.06
RNF144AP50876 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.4■□□□□ 0.06
RNF144AP50876 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF144AP50876 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF144AP50876 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF144AP50876 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC15.4■□□□□ 0.06
RNF144AP50876 Z83851.2-201ENST00000609564 659 ntBASIC15.4■□□□□ 0.06
RNF144AP50876 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF144AP50876 AC010507.1-201ENST00000633895 436 ntBASIC15.4■□□□□ 0.06
RNF144AP50876 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF144AP50876 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF144AP50876 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF144AP50876 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.4■□□□□ 0.06
RNF144AP50876 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF144AP50876 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF144AP50876 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.4■□□□□ 0.06
RNF144AP50876 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF144AP50876 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF144AP50876 AL031731.1-201ENST00000642131 2094 ntBASIC15.4■□□□□ 0.06
RNF144AP50876 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF144AP50876 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF144AP50876 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RNF144AP50876 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF144AP50876 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.4■□□□□ 0.06
RNF144AP50876 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF144AP50876 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF144AP50876 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.4■□□□□ 0.06
RNF144AP50876 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF144AP50876 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms