Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 PGAM5P1-201ENST00000518923 814 ntBASIC19.32■□□□□ 0.68
MRE11P49959 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.32■□□□□ 0.68
MRE11P49959 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.32■□□□□ 0.68
MRE11P49959 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.32■□□□□ 0.68
MRE11P49959 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MRE11P49959 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.32■□□□□ 0.68
MRE11P49959 AP001160.2-201ENST00000596071 487 ntBASIC19.32■□□□□ 0.68
MRE11P49959 AC064862.7-201ENST00000604520 867 ntBASIC19.32■□□□□ 0.68
MRE11P49959 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.32■□□□□ 0.68
MRE11P49959 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
MRE11P49959 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MRE11P49959 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MRE11P49959 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MRE11P49959 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.32■□□□□ 0.68
MRE11P49959 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MRE11P49959 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MRE11P49959 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.32■□□□□ 0.68
MRE11P49959 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.32■□□□□ 0.68
MRE11P49959 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MRE11P49959 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MRE11P49959 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
MRE11P49959 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MRE11P49959 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MRE11P49959 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MRE11P49959 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
MRE11P49959 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MRE11P49959 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC19.31■□□□□ 0.68
MRE11P49959 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC19.31■□□□□ 0.68
MRE11P49959 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MRE11P49959 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
MRE11P49959 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MRE11P49959 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MRE11P49959 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
MRE11P49959 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.31■□□□□ 0.68
MRE11P49959 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.31■□□□□ 0.68
MRE11P49959 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
MRE11P49959 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.31■□□□□ 0.68
MRE11P49959 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MRE11P49959 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MRE11P49959 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
MRE11P49959 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
MRE11P49959 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
MRE11P49959 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MRE11P49959 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MRE11P49959 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.31■□□□□ 0.68
MRE11P49959 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MRE11P49959 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
MRE11P49959 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MRE11P49959 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MRE11P49959 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MRE11P49959 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
MRE11P49959 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
MRE11P49959 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.3■□□□□ 0.68
MRE11P49959 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC19.3■□□□□ 0.68
MRE11P49959 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
MRE11P49959 AC023908.3-201ENST00000564211 3047 ntBASIC19.3■□□□□ 0.68
MRE11P49959 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
MRE11P49959 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.3■□□□□ 0.68
MRE11P49959 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MRE11P49959 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MRE11P49959 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MRE11P49959 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MRE11P49959 LCK-206ENST00000373564 2137 ntTSL 5 BASIC19.3■□□□□ 0.68
MRE11P49959 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
MRE11P49959 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.3■□□□□ 0.68
MRE11P49959 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
MRE11P49959 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.3■□□□□ 0.68
MRE11P49959 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MRE11P49959 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.3■□□□□ 0.68
MRE11P49959 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.3■□□□□ 0.68
MRE11P49959 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MRE11P49959 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
MRE11P49959 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MRE11P49959 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MRE11P49959 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MRE11P49959 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MRE11P49959 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MRE11P49959 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MRE11P49959 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.3■□□□□ 0.68
MRE11P49959 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.3■□□□□ 0.68
MRE11P49959 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.3■□□□□ 0.68
MRE11P49959 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.3■□□□□ 0.68
MRE11P49959 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.3■□□□□ 0.68
MRE11P49959 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.3■□□□□ 0.68
MRE11P49959 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.3■□□□□ 0.68
MRE11P49959 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.3■□□□□ 0.68
MRE11P49959 AP000867.3-201ENST00000524675 377 ntBASIC19.3■□□□□ 0.68
MRE11P49959 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MRE11P49959 TPSP2-201ENST00000561760 610 ntBASIC19.3■□□□□ 0.68
MRE11P49959 AC106730.1-201ENST00000566722 1090 ntBASIC19.3■□□□□ 0.68
MRE11P49959 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.3■□□□□ 0.68
MRE11P49959 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.3■□□□□ 0.68
MRE11P49959 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MRE11P49959 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.3■□□□□ 0.68
MRE11P49959 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MRE11P49959 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
MRE11P49959 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MRE11P49959 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
MRE11P49959 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
MRE11P49959 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms