Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HADHAP40939 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HADHAP40939 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HADHAP40939 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.74■□□□□ 0.27
HADHAP40939 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HADHAP40939 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HADHAP40939 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HADHAP40939 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
HADHAP40939 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HADHAP40939 IGLL3P-201ENST00000412472 434 ntBASIC16.74■□□□□ 0.27
HADHAP40939 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.74■□□□□ 0.27
HADHAP40939 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.74■□□□□ 0.27
HADHAP40939 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.74■□□□□ 0.27
HADHAP40939 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.74■□□□□ 0.27
HADHAP40939 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HADHAP40939 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.74■□□□□ 0.27
HADHAP40939 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.74■□□□□ 0.27
HADHAP40939 AL031432.2-201ENST00000566714 459 ntBASIC16.74■□□□□ 0.27
HADHAP40939 AL928711.1-201ENST00000570165 459 ntBASIC16.74■□□□□ 0.27
HADHAP40939 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.74■□□□□ 0.27
HADHAP40939 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.74■□□□□ 0.27
HADHAP40939 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.74■□□□□ 0.27
HADHAP40939 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.74■□□□□ 0.27
HADHAP40939 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.74■□□□□ 0.27
HADHAP40939 AC007064.4-201ENST00000637740 555 ntBASIC16.74■□□□□ 0.27
HADHAP40939 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HADHAP40939 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.74■□□□□ 0.27
HADHAP40939 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HADHAP40939 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HADHAP40939 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.74■□□□□ 0.27
HADHAP40939 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HADHAP40939 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.74■□□□□ 0.27
HADHAP40939 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HADHAP40939 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HADHAP40939 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HADHAP40939 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HADHAP40939 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.74■□□□□ 0.27
HADHAP40939 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HADHAP40939 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
HADHAP40939 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HADHAP40939 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HADHAP40939 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HADHAP40939 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.73■□□□□ 0.27
HADHAP40939 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.73■□□□□ 0.27
HADHAP40939 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HADHAP40939 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HADHAP40939 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HADHAP40939 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HADHAP40939 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HADHAP40939 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HADHAP40939 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HADHAP40939 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HADHAP40939 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HADHAP40939 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HADHAP40939 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HADHAP40939 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HADHAP40939 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
HADHAP40939 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.73■□□□□ 0.27
HADHAP40939 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.73■□□□□ 0.27
HADHAP40939 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.73■□□□□ 0.27
HADHAP40939 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HADHAP40939 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
HADHAP40939 RHOQP3-201ENST00000437982 621 ntBASIC16.73■□□□□ 0.27
HADHAP40939 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HADHAP40939 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HADHAP40939 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.73■□□□□ 0.27
HADHAP40939 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HADHAP40939 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.73■□□□□ 0.27
HADHAP40939 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HADHAP40939 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HADHAP40939 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HADHAP40939 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.73■□□□□ 0.27
HADHAP40939 SNX33P1-201ENST00000592116 1762 ntBASIC16.73■□□□□ 0.27
HADHAP40939 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.73■□□□□ 0.27
HADHAP40939 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HADHAP40939 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.73■□□□□ 0.27
HADHAP40939 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
HADHAP40939 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HADHAP40939 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.73■□□□□ 0.27
HADHAP40939 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HADHAP40939 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HADHAP40939 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HADHAP40939 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HADHAP40939 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.73■□□□□ 0.27
HADHAP40939 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.73■□□□□ 0.27
HADHAP40939 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HADHAP40939 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HADHAP40939 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HADHAP40939 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HADHAP40939 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HADHAP40939 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.72■□□□□ 0.27
HADHAP40939 AC092364.2-201ENST00000596710 2692 ntBASIC16.72■□□□□ 0.27
HADHAP40939 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HADHAP40939 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HADHAP40939 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HADHAP40939 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HADHAP40939 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HADHAP40939 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.72■□□□□ 0.27
HADHAP40939 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.72■□□□□ 0.27
HADHAP40939 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms