Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MDH1P40925 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MDH1P40925 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MDH1P40925 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MDH1P40925 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.63■□□□□ 0.25
MDH1P40925 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MDH1P40925 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MDH1P40925 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MDH1P40925 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MDH1P40925 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
MDH1P40925 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.63■□□□□ 0.25
MDH1P40925 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
MDH1P40925 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.63■□□□□ 0.25
MDH1P40925 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.63■□□□□ 0.25
MDH1P40925 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.63■□□□□ 0.25
MDH1P40925 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.63■□□□□ 0.25
MDH1P40925 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.63■□□□□ 0.25
MDH1P40925 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.63■□□□□ 0.25
MDH1P40925 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MDH1P40925 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.63■□□□□ 0.25
MDH1P40925 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MDH1P40925 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.63■□□□□ 0.25
MDH1P40925 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MDH1P40925 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.63■□□□□ 0.25
MDH1P40925 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MDH1P40925 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MDH1P40925 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MDH1P40925 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MDH1P40925 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MDH1P40925 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MDH1P40925 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MDH1P40925 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.63■□□□□ 0.25
MDH1P40925 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MDH1P40925 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.63■□□□□ 0.25
MDH1P40925 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
MDH1P40925 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.62■□□□□ 0.25
MDH1P40925 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
MDH1P40925 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MDH1P40925 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MDH1P40925 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.62■□□□□ 0.25
MDH1P40925 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
MDH1P40925 KRT8P39-201ENST00000396270 1433 ntBASIC16.62■□□□□ 0.25
MDH1P40925 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MDH1P40925 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MDH1P40925 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MDH1P40925 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.62■□□□□ 0.25
MDH1P40925 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MDH1P40925 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MDH1P40925 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.62■□□□□ 0.25
MDH1P40925 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MDH1P40925 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.62■□□□□ 0.25
MDH1P40925 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.62■□□□□ 0.25
MDH1P40925 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MDH1P40925 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MDH1P40925 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
MDH1P40925 MIR662-201ENST00000384847 95 ntBASIC16.62■□□□□ 0.25
MDH1P40925 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MDH1P40925 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.62■□□□□ 0.25
MDH1P40925 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.62■□□□□ 0.25
MDH1P40925 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.62■□□□□ 0.25
MDH1P40925 NUS1P1-201ENST00000446295 882 ntBASIC16.62■□□□□ 0.25
MDH1P40925 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
MDH1P40925 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MDH1P40925 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MDH1P40925 AL138831.2-201ENST00000606564 490 ntBASIC16.62■□□□□ 0.25
MDH1P40925 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MDH1P40925 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.62■□□□□ 0.25
MDH1P40925 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
MDH1P40925 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MDH1P40925 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MDH1P40925 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MDH1P40925 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
MDH1P40925 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MDH1P40925 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MDH1P40925 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MDH1P40925 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
MDH1P40925 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MDH1P40925 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.62■□□□□ 0.25
MDH1P40925 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MDH1P40925 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MDH1P40925 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
MDH1P40925 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MDH1P40925 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MDH1P40925 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
MDH1P40925 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MDH1P40925 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MDH1P40925 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MDH1P40925 AC087481.3-201ENST00000602886 1894 ntBASIC16.61■□□□□ 0.25
MDH1P40925 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.61■□□□□ 0.25
MDH1P40925 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MDH1P40925 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.61■□□□□ 0.25
MDH1P40925 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.61■□□□□ 0.25
MDH1P40925 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MDH1P40925 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MDH1P40925 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MDH1P40925 FAM8A6P-201ENST00000407496 1135 ntBASIC16.61■□□□□ 0.25
MDH1P40925 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.61■□□□□ 0.25
MDH1P40925 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.61■□□□□ 0.25
MDH1P40925 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MDH1P40925 AC010654.1-201ENST00000615722 808 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms