Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN1P35523 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.84■□□□□ 0.61
CLCN1P35523 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN1P35523 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.84■□□□□ 0.61
CLCN1P35523 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CLCN1P35523 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC18.84■□□□□ 0.61
CLCN1P35523 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLCN1P35523 IER3-202ENST00000376377 1350 ntBASIC18.84■□□□□ 0.61
CLCN1P35523 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.84■□□□□ 0.61
CLCN1P35523 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CLCN1P35523 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN1P35523 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN1P35523 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CLCN1P35523 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC18.84■□□□□ 0.61
CLCN1P35523 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN1P35523 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC18.84■□□□□ 0.61
CLCN1P35523 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN1P35523 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN1P35523 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN1P35523 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CLCN1P35523 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.84■□□□□ 0.61
CLCN1P35523 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.84■□□□□ 0.61
CLCN1P35523 TSSC2-201ENST00000450217 709 ntBASIC18.84■□□□□ 0.61
CLCN1P35523 AL109954.1-202ENST00000564051 2148 ntBASIC18.84■□□□□ 0.61
CLCN1P35523 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN1P35523 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN1P35523 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.84■□□□□ 0.61
CLCN1P35523 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.84■□□□□ 0.61
CLCN1P35523 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLCN1P35523 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.84■□□□□ 0.61
CLCN1P35523 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN1P35523 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN1P35523 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN1P35523 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CLCN1P35523 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC18.84■□□□□ 0.61
CLCN1P35523 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN1P35523 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN1P35523 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.84■□□□□ 0.61
CLCN1P35523 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.84■□□□□ 0.61
CLCN1P35523 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLCN1P35523 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN1P35523 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN1P35523 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.84■□□□□ 0.61
CLCN1P35523 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCN1P35523 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
CLCN1P35523 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.84■□□□□ 0.61
CLCN1P35523 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLCN1P35523 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.83■□□□□ 0.61
CLCN1P35523 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CLCN1P35523 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLCN1P35523 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLCN1P35523 AC005912.2-201ENST00000619492 2400 ntBASIC18.83■□□□□ 0.61
CLCN1P35523 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
CLCN1P35523 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.83■□□□□ 0.61
CLCN1P35523 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC18.83■□□□□ 0.61
CLCN1P35523 CICP23-201ENST00000605013 2741 ntBASIC18.83■□□□□ 0.61
CLCN1P35523 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.83■□□□□ 0.61
CLCN1P35523 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLCN1P35523 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CLCN1P35523 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CLCN1P35523 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.83■□□□□ 0.61
CLCN1P35523 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CLCN1P35523 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLCN1P35523 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLCN1P35523 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLCN1P35523 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCN1P35523 AC246785.2-201ENST00000432512 513 ntBASIC18.83■□□□□ 0.6
CLCN1P35523 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLCN1P35523 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.83■□□□□ 0.6
CLCN1P35523 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.83■□□□□ 0.6
CLCN1P35523 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.83■□□□□ 0.6
CLCN1P35523 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.83■□□□□ 0.6
CLCN1P35523 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCN1P35523 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCN1P35523 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCN1P35523 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CLCN1P35523 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCN1P35523 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCN1P35523 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCN1P35523 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.83■□□□□ 0.6
CLCN1P35523 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLCN1P35523 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCN1P35523 AL122018.1-201ENST00000446607 2310 ntBASIC18.83■□□□□ 0.6
CLCN1P35523 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CLCN1P35523 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
CLCN1P35523 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CLCN1P35523 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCN1P35523 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CLCN1P35523 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN1P35523 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN1P35523 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.82■□□□□ 0.6
CLCN1P35523 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN1P35523 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN1P35523 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN1P35523 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN1P35523 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CLCN1P35523 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN1P35523 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CLCN1P35523 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.82■□□□□ 0.6
CLCN1P35523 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms