Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A4P31645 AC005622.1-201ENST00000636801 1703 ntBASIC16.9■□□□□ 0.3
SLC6A4P31645 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A4P31645 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC6A4P31645 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A4P31645 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SLC6A4P31645 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.89■□□□□ 0.3
SLC6A4P31645 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A4P31645 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC6A4P31645 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC6A4P31645 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
SLC6A4P31645 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A4P31645 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC6A4P31645 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC6A4P31645 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A4P31645 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A4P31645 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
SLC6A4P31645 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.89■□□□□ 0.29
SLC6A4P31645 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SLC6A4P31645 KLF2P3-201ENST00000451977 1087 ntBASIC16.89■□□□□ 0.29
SLC6A4P31645 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SLC6A4P31645 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A4P31645 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.89■□□□□ 0.29
SLC6A4P31645 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.89■□□□□ 0.29
SLC6A4P31645 AL390955.2-201ENST00000603032 514 ntBASIC16.89■□□□□ 0.29
SLC6A4P31645 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
SLC6A4P31645 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A4P31645 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC6A4P31645 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A4P31645 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC6A4P31645 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A4P31645 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A4P31645 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SLC6A4P31645 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A4P31645 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC6A4P31645 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A4P31645 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A4P31645 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.89■□□□□ 0.29
SLC6A4P31645 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A4P31645 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SLC6A4P31645 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC6A4P31645 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A4P31645 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SLC6A4P31645 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SLC6A4P31645 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A4P31645 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A4P31645 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC6A4P31645 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
SLC6A4P31645 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC6A4P31645 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
SLC6A4P31645 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A4P31645 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SLC6A4P31645 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC6A4P31645 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
SLC6A4P31645 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A4P31645 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC6A4P31645 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SLC6A4P31645 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A4P31645 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC6A4P31645 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC6A4P31645 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A4P31645 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
SLC6A4P31645 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC6A4P31645 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SLC6A4P31645 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A4P31645 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A4P31645 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC6A4P31645 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC6A4P31645 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SLC6A4P31645 AC125807.1-201ENST00000483097 614 ntBASIC16.88■□□□□ 0.29
SLC6A4P31645 AC067863.1-201ENST00000494933 530 ntBASIC16.88■□□□□ 0.29
SLC6A4P31645 RNA5SP410-201ENST00000516285 106 ntBASIC16.88■□□□□ 0.29
SLC6A4P31645 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC6A4P31645 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC6A4P31645 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC6A4P31645 AC005498.2-205ENST00000593218 784 ntBASIC16.88■□□□□ 0.29
SLC6A4P31645 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC6A4P31645 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
SLC6A4P31645 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A4P31645 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A4P31645 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC6A4P31645 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.88■□□□□ 0.29
SLC6A4P31645 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A4P31645 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A4P31645 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SLC6A4P31645 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A4P31645 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.88■□□□□ 0.29
SLC6A4P31645 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A4P31645 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A4P31645 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A4P31645 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A4P31645 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC6A4P31645 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SLC6A4P31645 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC6A4P31645 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SLC6A4P31645 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A4P31645 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A4P31645 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SLC6A4P31645 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A4P31645 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms