Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 FXR1-221ENST00000491674 365 ntTSL 2 BASIC20.23■□□□□ 0.83
TM4SF1P30408 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC20.23■□□□□ 0.83
TM4SF1P30408 AP002490.2-201ENST00000524791 560 ntBASIC20.23■□□□□ 0.83
TM4SF1P30408 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
TM4SF1P30408 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC20.23■□□□□ 0.83
TM4SF1P30408 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC20.23■□□□□ 0.83
TM4SF1P30408 PIGL-212ENST00000581006 554 ntTSL 4 BASIC20.23■□□□□ 0.83
TM4SF1P30408 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC20.23■□□□□ 0.83
TM4SF1P30408 AC133539.2-201ENST00000604757 467 ntBASIC20.23■□□□□ 0.83
TM4SF1P30408 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TM4SF1P30408 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TM4SF1P30408 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TM4SF1P30408 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TM4SF1P30408 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.23■□□□□ 0.83
TM4SF1P30408 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TM4SF1P30408 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TM4SF1P30408 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.22■□□□□ 0.83
TM4SF1P30408 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TM4SF1P30408 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TM4SF1P30408 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.22■□□□□ 0.83
TM4SF1P30408 U82695.1-201ENST00000635752 1889 ntBASIC20.22■□□□□ 0.83
TM4SF1P30408 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.22■□□□□ 0.83
TM4SF1P30408 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
TM4SF1P30408 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TM4SF1P30408 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TM4SF1P30408 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC20.22■□□□□ 0.83
TM4SF1P30408 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TM4SF1P30408 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TM4SF1P30408 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TM4SF1P30408 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TM4SF1P30408 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TM4SF1P30408 USB1-202ENST00000423271 1217 ntTSL 2 BASIC20.22■□□□□ 0.83
TM4SF1P30408 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC20.22■□□□□ 0.83
TM4SF1P30408 AL162726.2-201ENST00000438986 1017 ntBASIC20.22■□□□□ 0.83
TM4SF1P30408 RPL13P2-201ENST00000440687 659 ntBASIC20.22■□□□□ 0.83
TM4SF1P30408 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC20.22■□□□□ 0.83
TM4SF1P30408 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC20.22■□□□□ 0.83
TM4SF1P30408 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC20.22■□□□□ 0.83
TM4SF1P30408 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC20.22■□□□□ 0.83
TM4SF1P30408 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC20.22■□□□□ 0.83
TM4SF1P30408 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TM4SF1P30408 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC20.22■□□□□ 0.83
TM4SF1P30408 CU634019.7-201ENST00000624153 1185 ntBASIC20.22■□□□□ 0.83
TM4SF1P30408 FP236241.2-201ENST00000624906 1185 ntBASIC20.22■□□□□ 0.83
TM4SF1P30408 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC20.22■□□□□ 0.83
TM4SF1P30408 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC20.22■□□□□ 0.83
TM4SF1P30408 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TM4SF1P30408 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.22■□□□□ 0.83
TM4SF1P30408 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TM4SF1P30408 AMT-232ENST00000636199 1546 ntTSL 5 BASIC20.22■□□□□ 0.83
TM4SF1P30408 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TM4SF1P30408 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TM4SF1P30408 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TM4SF1P30408 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TM4SF1P30408 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TM4SF1P30408 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TM4SF1P30408 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
TM4SF1P30408 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TM4SF1P30408 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TM4SF1P30408 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC20.21■□□□□ 0.83
TM4SF1P30408 FO681548.1-201ENST00000455617 1132 ntBASIC20.21■□□□□ 0.83
TM4SF1P30408 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TM4SF1P30408 APRT-204ENST00000563655 709 ntTSL 5 BASIC20.21■□□□□ 0.83
TM4SF1P30408 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TM4SF1P30408 BRI3BPP1-201ENST00000594224 787 ntBASIC20.21■□□□□ 0.83
TM4SF1P30408 AL022328.1-201ENST00000610050 478 ntBASIC20.21■□□□□ 0.83
TM4SF1P30408 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC20.21■□□□□ 0.83
TM4SF1P30408 AC018470.1-201ENST00000624790 3129 ntBASIC20.21■□□□□ 0.83
TM4SF1P30408 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TM4SF1P30408 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.21■□□□□ 0.83
TM4SF1P30408 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TM4SF1P30408 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TM4SF1P30408 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TM4SF1P30408 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TM4SF1P30408 HNRNPA1P48-201ENST00000562726 1377 ntBASIC20.21■□□□□ 0.83
TM4SF1P30408 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.2■□□□□ 0.82
TM4SF1P30408 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM4SF1P30408 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM4SF1P30408 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TM4SF1P30408 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM4SF1P30408 HAUS4P1-201ENST00000406739 1145 ntBASIC20.2■□□□□ 0.82
TM4SF1P30408 BCYRN1-201ENST00000418539 200 ntBASIC20.2■□□□□ 0.82
TM4SF1P30408 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC20.2■□□□□ 0.82
TM4SF1P30408 RPL7P3-201ENST00000441388 714 ntBASIC20.2■□□□□ 0.82
TM4SF1P30408 AC108725.1-201ENST00000495472 409 ntBASIC20.2■□□□□ 0.82
TM4SF1P30408 AL359711.2-201ENST00000563105 872 ntBASIC20.2■□□□□ 0.82
TM4SF1P30408 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC20.2■□□□□ 0.82
TM4SF1P30408 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC20.2■□□□□ 0.82
TM4SF1P30408 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC20.2■□□□□ 0.82
TM4SF1P30408 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC20.2■□□□□ 0.82
TM4SF1P30408 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.2■□□□□ 0.82
TM4SF1P30408 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
TM4SF1P30408 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM4SF1P30408 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TM4SF1P30408 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM4SF1P30408 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM4SF1P30408 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TM4SF1P30408 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TM4SF1P30408 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM4SF1P30408 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms