Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 CLUHP6-201ENST00000580789 941 ntBASIC19.46■□□□□ 0.71
COL4A5P29400 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC19.46■□□□□ 0.71
COL4A5P29400 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC19.46■□□□□ 0.71
COL4A5P29400 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A5P29400 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A5P29400 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A5P29400 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A5P29400 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A5P29400 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A5P29400 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.45■□□□□ 0.7
COL4A5P29400 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A5P29400 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.45■□□□□ 0.7
COL4A5P29400 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A5P29400 GZMB-202ENST00000382540 816 ntTSL 5 BASIC19.45■□□□□ 0.7
COL4A5P29400 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.45■□□□□ 0.7
COL4A5P29400 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.45■□□□□ 0.7
COL4A5P29400 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A5P29400 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A5P29400 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A5P29400 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A5P29400 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.45■□□□□ 0.7
COL4A5P29400 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.45■□□□□ 0.7
COL4A5P29400 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
COL4A5P29400 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
COL4A5P29400 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL4A5P29400 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL4A5P29400 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL4A5P29400 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
COL4A5P29400 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.44■□□□□ 0.7
COL4A5P29400 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL4A5P29400 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC19.44■□□□□ 0.7
COL4A5P29400 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.44■□□□□ 0.7
COL4A5P29400 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.44■□□□□ 0.7
COL4A5P29400 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC19.44■□□□□ 0.7
COL4A5P29400 AC103810.3-201ENST00000583567 96 ntBASIC19.44■□□□□ 0.7
COL4A5P29400 AL049840.4-201ENST00000602422 811 ntBASIC19.44■□□□□ 0.7
COL4A5P29400 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC19.44■□□□□ 0.7
COL4A5P29400 AC005252.2-201ENST00000624630 1141 ntBASIC19.44■□□□□ 0.7
COL4A5P29400 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL4A5P29400 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.44■□□□□ 0.7
COL4A5P29400 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
COL4A5P29400 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL4A5P29400 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL4A5P29400 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.43■□□□□ 0.7
COL4A5P29400 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.43■□□□□ 0.7
COL4A5P29400 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A5P29400 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
COL4A5P29400 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A5P29400 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
COL4A5P29400 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC19.43■□□□□ 0.7
COL4A5P29400 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC19.43■□□□□ 0.7
COL4A5P29400 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A5P29400 HLA-DPB2-205ENST00000435074 1188 ntBASIC19.43■□□□□ 0.7
COL4A5P29400 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC19.43■□□□□ 0.7
COL4A5P29400 FAM86HP-204ENST00000513466 959 ntBASIC19.43■□□□□ 0.7
COL4A5P29400 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC19.43■□□□□ 0.7
COL4A5P29400 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.43■□□□□ 0.7
COL4A5P29400 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC19.43■□□□□ 0.7
COL4A5P29400 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
COL4A5P29400 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC19.43■□□□□ 0.7
COL4A5P29400 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A5P29400 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.43■□□□□ 0.7
COL4A5P29400 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.43■□□□□ 0.7
COL4A5P29400 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A5P29400 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A5P29400 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.43■□□□□ 0.7
COL4A5P29400 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A5P29400 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.43■□□□□ 0.7
COL4A5P29400 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A5P29400 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.43■□□□□ 0.7
COL4A5P29400 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.43■□□□□ 0.7
COL4A5P29400 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A5P29400 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A5P29400 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.43■□□□□ 0.7
COL4A5P29400 TPO-206ENST00000382269 1155 ntTSL 5 BASIC19.43■□□□□ 0.7
COL4A5P29400 RNA5SP423-201ENST00000517127 109 ntBASIC19.43■□□□□ 0.7
COL4A5P29400 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC19.43■□□□□ 0.7
COL4A5P29400 AC120045.2-201ENST00000567334 178 ntBASIC19.43■□□□□ 0.7
COL4A5P29400 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A5P29400 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A5P29400 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
COL4A5P29400 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.43■□□□□ 0.7
COL4A5P29400 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A5P29400 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A5P29400 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A5P29400 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.42■□□□□ 0.7
COL4A5P29400 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
COL4A5P29400 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A5P29400 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A5P29400 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.42■□□□□ 0.7
COL4A5P29400 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
COL4A5P29400 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A5P29400 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
COL4A5P29400 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A5P29400 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.42■□□□□ 0.7
COL4A5P29400 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC19.42■□□□□ 0.7
COL4A5P29400 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC19.42■□□□□ 0.7
COL4A5P29400 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC19.42■□□□□ 0.7
COL4A5P29400 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.42■□□□□ 0.7
COL4A5P29400 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms