Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LAMA1P25391 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.91■□□□□ 0.14
LAMA1P25391 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
LAMA1P25391 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LAMA1P25391 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.91■□□□□ 0.14
LAMA1P25391 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LAMA1P25391 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.91■□□□□ 0.14
LAMA1P25391 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.91■□□□□ 0.14
LAMA1P25391 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LAMA1P25391 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.91■□□□□ 0.14
LAMA1P25391 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.91■□□□□ 0.14
LAMA1P25391 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.91■□□□□ 0.14
LAMA1P25391 AC009053.2-201ENST00000563701 2365 ntBASIC15.9■□□□□ 0.14
LAMA1P25391 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LAMA1P25391 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
LAMA1P25391 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LAMA1P25391 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LAMA1P25391 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.9■□□□□ 0.14
LAMA1P25391 RNF165-205ENST00000588679 2904 ntBASIC15.9■□□□□ 0.14
LAMA1P25391 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LAMA1P25391 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LAMA1P25391 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.9■□□□□ 0.14
LAMA1P25391 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.9■□□□□ 0.14
LAMA1P25391 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.9■□□□□ 0.14
LAMA1P25391 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LAMA1P25391 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
LAMA1P25391 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LAMA1P25391 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
LAMA1P25391 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LAMA1P25391 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LAMA1P25391 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LAMA1P25391 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LAMA1P25391 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LAMA1P25391 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LAMA1P25391 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.9■□□□□ 0.14
LAMA1P25391 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.9■□□□□ 0.14
LAMA1P25391 MEP1AP4-201ENST00000423244 1087 ntBASIC15.9■□□□□ 0.14
LAMA1P25391 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.9■□□□□ 0.14
LAMA1P25391 SERBP1P3-201ENST00000459980 809 ntBASIC15.9■□□□□ 0.14
LAMA1P25391 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.9■□□□□ 0.14
LAMA1P25391 MIR5189-201ENST00000577370 114 ntBASIC15.9■□□□□ 0.14
LAMA1P25391 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LAMA1P25391 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.9■□□□□ 0.14
LAMA1P25391 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.9■□□□□ 0.14
LAMA1P25391 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LAMA1P25391 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.89■□□□□ 0.13
LAMA1P25391 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LAMA1P25391 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LAMA1P25391 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LAMA1P25391 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.89■□□□□ 0.13
LAMA1P25391 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.89■□□□□ 0.13
LAMA1P25391 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.89■□□□□ 0.13
LAMA1P25391 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
LAMA1P25391 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.89■□□□□ 0.13
LAMA1P25391 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.89■□□□□ 0.13
LAMA1P25391 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.89■□□□□ 0.13
LAMA1P25391 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LAMA1P25391 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LAMA1P25391 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.89■□□□□ 0.13
LAMA1P25391 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LAMA1P25391 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LAMA1P25391 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.89■□□□□ 0.13
LAMA1P25391 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
LAMA1P25391 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LAMA1P25391 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.89■□□□□ 0.13
LAMA1P25391 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LAMA1P25391 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LAMA1P25391 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.89■□□□□ 0.13
LAMA1P25391 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.89■□□□□ 0.13
LAMA1P25391 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LAMA1P25391 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LAMA1P25391 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LAMA1P25391 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LAMA1P25391 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LAMA1P25391 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.89■□□□□ 0.13
LAMA1P25391 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LAMA1P25391 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LAMA1P25391 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.88■□□□□ 0.13
LAMA1P25391 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.88■□□□□ 0.13
LAMA1P25391 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
LAMA1P25391 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.88■□□□□ 0.13
LAMA1P25391 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LAMA1P25391 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LAMA1P25391 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LAMA1P25391 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.88■□□□□ 0.13
LAMA1P25391 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LAMA1P25391 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LAMA1P25391 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.88■□□□□ 0.13
LAMA1P25391 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LAMA1P25391 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LAMA1P25391 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.88■□□□□ 0.13
LAMA1P25391 TIMM17BP1-201ENST00000545713 516 ntBASIC15.88■□□□□ 0.13
LAMA1P25391 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.88■□□□□ 0.13
LAMA1P25391 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.88■□□□□ 0.13
LAMA1P25391 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
LAMA1P25391 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LAMA1P25391 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LAMA1P25391 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.88■□□□□ 0.13
LAMA1P25391 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LAMA1P25391 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms