Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 AC092658.1-201ENST00000505836 891 ntBASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 FUZ-207ENST00000526575 482 ntTSL 4 BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 MIR4259-201ENST00000584466 101 ntBASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 AC093726.1-201ENST00000608064 963 ntBASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 AL391256.1-201ENST00000443260 1855 ntBASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CSB-PGBD3P0DP91 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSB-PGBD3P0DP91 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSB-PGBD3P0DP91 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
CSB-PGBD3P0DP91 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSB-PGBD3P0DP91 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC21.71■■□□□ 1.07
CSB-PGBD3P0DP91 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSB-PGBD3P0DP91 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSB-PGBD3P0DP91 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC21.71■■□□□ 1.07
CSB-PGBD3P0DP91 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC21.71■■□□□ 1.07
CSB-PGBD3P0DP91 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CSB-PGBD3P0DP91 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC21.71■■□□□ 1.07
CSB-PGBD3P0DP91 AC020765.3-201ENST00000613051 740 ntBASIC21.71■■□□□ 1.07
CSB-PGBD3P0DP91 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CSB-PGBD3P0DP91 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CSB-PGBD3P0DP91 AL512652.2-201ENST00000625156 1716 ntBASIC21.71■■□□□ 1.07
CSB-PGBD3P0DP91 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CSB-PGBD3P0DP91 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSB-PGBD3P0DP91 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CSB-PGBD3P0DP91 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSB-PGBD3P0DP91 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSB-PGBD3P0DP91 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC21.7■■□□□ 1.07
CSB-PGBD3P0DP91 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 RAD18-204ENST00000418463 563 ntTSL 4 BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 RAD18-205ENST00000421052 582 ntTSL 3 BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 FADS2-205ENST00000517839 469 ntTSL 3 BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 WFDC1-204ENST00000613603 549 ntBASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSB-PGBD3P0DP91 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSB-PGBD3P0DP91 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CSB-PGBD3P0DP91 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSB-PGBD3P0DP91 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CSB-PGBD3P0DP91 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CSB-PGBD3P0DP91 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSB-PGBD3P0DP91 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSB-PGBD3P0DP91 MPV17-208ENST00000405076 603 ntTSL 5 BASIC21.69■■□□□ 1.06
CSB-PGBD3P0DP91 RPL28-204ENST00000431533 590 ntTSL 2 BASIC21.69■■□□□ 1.06
CSB-PGBD3P0DP91 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC21.69■■□□□ 1.06
CSB-PGBD3P0DP91 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC21.69■■□□□ 1.06
CSB-PGBD3P0DP91 AC007389.4-201ENST00000454674 793 ntBASIC21.69■■□□□ 1.06
CSB-PGBD3P0DP91 AL139010.1-201ENST00000454878 894 ntBASIC21.69■■□□□ 1.06
CSB-PGBD3P0DP91 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC21.69■■□□□ 1.06
CSB-PGBD3P0DP91 RPL28-206ENST00000558752 671 ntTSL 3 BASIC21.69■■□□□ 1.06
CSB-PGBD3P0DP91 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC21.69■■□□□ 1.06
CSB-PGBD3P0DP91 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC21.69■■□□□ 1.06
CSB-PGBD3P0DP91 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CSB-PGBD3P0DP91 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
CSB-PGBD3P0DP91 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CSB-PGBD3P0DP91 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms